Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 AC011374.2-201ENST00000607135 526 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 PART1_1.1-201ENST00000611761 217 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 Z97988.1-201ENST00000637697 135 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 SNRPGP10-201ENST00000432323 225 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 AC090616.4-201ENST00000448026 115 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 AC016632.1-201ENST00000503994 196 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 RNU6-966P-201ENST00000516479 104 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 AL163152.1-201ENST00000642001 374 ntBASIC-1.63□□□□□ -2.67
ZFHX4Q86UP3 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 MTND1P26-201ENST00000440488 538 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 SNORD2-201ENST00000459163 69 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 RNU2-10P-201ENST00000516375 211 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 RPS29P13-201ENST00000402041 169 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 RNU6-141P-201ENST00000410499 105 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 RPL30P10-201ENST00000488148 337 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 MTND3P5-201ENST00000512798 333 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 MIR4490-201ENST00000582647 84 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 VN1R87P-201ENST00000596706 487 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 AC005002.2-201ENST00000438228 269 ntBASIC-1.64□□□□□ -2.67
ZFHX4Q86UP3 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 RPS3AP3-201ENST00000411933 242 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 MTATP6P13-201ENST00000438531 667 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 U6.107-201ENST00000637108 79 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 RNU6-190P-201ENST00000384154 102 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 RNU6-154P-201ENST00000384306 106 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 MIR549A-201ENST00000385268 96 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 SNORA26.4-201ENST00000391188 123 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 RNA5SP106-201ENST00000517274 100 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 AC011603.4-201ENST00000611325 277 ntBASIC-1.65□□□□□ -2.67
ZFHX4Q86UP3 MIR20A-201ENST00000362279 71 ntBASIC-1.66□□□□□ -2.67
ZFHX4Q86UP3 AC244090.1-201ENST00000441884 93 ntBASIC-1.66□□□□□ -2.67
ZFHX4Q86UP3 MIR4308-201ENST00000580634 81 ntBASIC-1.66□□□□□ -2.67
ZFHX4Q86UP3 SNORA63.5-201ENST00000363548 123 ntBASIC-1.66□□□□□ -2.68
ZFHX4Q86UP3 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.66□□□□□ -2.68
ZFHX4Q86UP3 MIR539-201ENST00000365690 78 ntBASIC-1.66□□□□□ -2.68
ZFHX4Q86UP3 MIR15B-201ENST00000385045 98 ntBASIC-1.66□□□□□ -2.68
ZFHX4Q86UP3 RNU6-519P-201ENST00000410590 108 ntBASIC-1.66□□□□□ -2.68
ZFHX4Q86UP3 MTND5P34-201ENST00000568888 325 ntBASIC-1.66□□□□□ -2.68
ZFHX4Q86UP3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.66□□□□□ -2.68
ZFHX4Q86UP3 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 AL365338.1-201ENST00000422282 858 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 RNY4P25-201ENST00000459254 96 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 RNU6-416P-201ENST00000516265 103 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 AC073648.5-201ENST00000603502 305 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 Z99497.2-201ENST00000603634 310 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 uc_338.4-201ENST00000616635 176 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 RNU4-15P-201ENST00000362613 141 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 SNORA49-201ENST00000386157 136 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 MIR1253-201ENST00000408273 105 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 COX7BP2-201ENST00000437976 242 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 AL353691.2-201ENST00000443795 59 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 AC074290.1-201ENST00000448883 135 ntBASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.67□□□□□ -2.68
ZFHX4Q86UP3 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 RNU6-549P-201ENST00000384433 107 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 RNU6-143P-201ENST00000516942 93 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AC103996.1-201ENST00000555468 102 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AL158042.1-201ENST00000605338 460 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AP001033.2-201ENST00000609701 1003 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 SNORD93-201ENST00000408813 74 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 RNU2-9P-201ENST00000410194 145 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AC022447.4-201ENST00000504053 364 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 MIR562-201ENST00000384894 95 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 MTND3P4-201ENST00000453537 303 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AL122001.1-201ENST00000457027 370 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AC091951.3-201ENST00000504093 246 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AC093783.1-201ENST00000612976 329 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 AC138649.3-201ENST00000622154 254 ntBASIC-1.68□□□□□ -2.68
ZFHX4Q86UP3 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 RNU2-56P-201ENST00000516826 190 ntBASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 MIR516B2-201ENST00000385190 85 ntBASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 MTND1P21-201ENST00000412991 285 ntBASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 AC005178.1-201ENST00000508392 440 ntBASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 RNU6-125P-201ENST00000384505 107 ntBASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 MIR136-201ENST00000385207 82 ntBASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 USP9YP28-201ENST00000435142 589 ntBASIC-1.69□□□□□ -2.68
ZFHX4Q86UP3 AL353572.1-201ENST00000442490 417 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms