Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MIR3664-201ENST00000579074 99 ntBASIC1.36□□□□□ -2.19
LDB1Q86U70 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.36□□□□□ -2.19
LDB1Q86U70 snoU2_19.2-201ENST00000363024 80 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 RNU6-801P-201ENST00000364087 105 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 SNORA72.4-201ENST00000384174 132 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 MIR522-201ENST00000385071 87 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LDB1Q86U70 SNORA53-201ENST00000391141 249 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 MLLT10P1-201ENST00000418346 262 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 PIGPP3-201ENST00000425307 415 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 AL603825.1-201ENST00000438481 80 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 AL731563.1-201ENST00000442202 214 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 AC114811.1-201ENST00000507207 168 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
LDB1Q86U70 AP003733.2-201ENST00000529409 171 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 AL442663.2-201ENST00000554385 511 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 AC037487.3-201ENST00000606668 112 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
LDB1Q86U70 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LDB1Q86U70 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
LDB1Q86U70 Y_RNA.203-201ENST00000364106 102 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 RNU6-806P-201ENST00000365147 105 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 RNU6-131P-201ENST00000391144 107 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 AL451046.2-201ENST00000403074 277 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.34□□□□□ -2.19
LDB1Q86U70 RPL21P38-201ENST00000418090 167 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 BTF3P4-201ENST00000418852 495 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 SNRPGP10-201ENST00000432323 225 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 MTCO1P5-201ENST00000433573 344 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 RNU7-141P-201ENST00000459304 62 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 RNU6-917P-201ENST00000516294 104 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 RNU6-922P-201ENST00000516753 99 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 RNU2-31P-201ENST00000516954 155 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.34□□□□□ -2.19
LDB1Q86U70 AL161670.1-201ENST00000554348 137 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 CYP3A52P-201ENST00000563326 91 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 GHRLOS.1-201ENST00000610995 70 ntBASIC1.34□□□□□ -2.19
LDB1Q86U70 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.34□□□□□ -2.19
LDB1Q86U70 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
LDB1Q86U70 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
LDB1Q86U70 RNU6-1084P-201ENST00000362498 107 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 Y_RNA.64-201ENST00000362845 102 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 RNU6-326P-201ENST00000365480 107 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 Y_RNA.541-201ENST00000384640 113 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 MIR215-201ENST00000384858 110 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 RNU2-14P-201ENST00000411053 191 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 AP1B1P2-201ENST00000416196 106 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.33□□□□□ -2.2
LDB1Q86U70 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 RN7SKP88-201ENST00000516847 250 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 AC006504.6-201ENST00000590142 199 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 AL512605.2-201ENST00000592972 256 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 7SK.8-201ENST00000612110 250 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 7SK.11-201ENST00000615477 250 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 7SK.13-201ENST00000622040 250 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 AC022140.2-201ENST00000623500 188 ntBASIC1.33□□□□□ -2.2
LDB1Q86U70 Y_RNA.26-201ENST00000362539 101 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 SNORA63-201ENST00000363450 132 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 RNU6-1048P-201ENST00000364054 107 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 Y_RNA.326-201ENST00000365176 113 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 MIR452-201ENST00000385020 85 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 SNORA26.5-201ENST00000391215 123 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 SNORA36B-201ENST00000410438 131 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 RNU6-437P-201ENST00000459408 95 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 MIR2681-201ENST00000581814 105 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 JPX_2.1-201ENST00000614161 69 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.32□□□□□ -2.2
LDB1Q86U70 SNORA25.1-201ENST00000362326 128 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 RNU6-899P-201ENST00000363947 107 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 snoU2-30.1-201ENST00000365012 70 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 RNU6-514P-201ENST00000384208 107 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 AC113618.1-201ENST00000416747 285 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 AC009474.2-201ENST00000451383 136 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 SNORD45.4-201ENST00000516629 73 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 AL357312.1-201ENST00000603879 298 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 AC007742.2-201ENST00000618226 398 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 MIR8065-201ENST00000620577 100 ntBASIC1.31□□□□□ -2.2
LDB1Q86U70 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LDB1Q86U70 AC134026.1-201ENST00000623249 2239 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 RNU6-674P-201ENST00000363831 107 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 RNU6-1011P-201ENST00000384668 107 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 MIR526A1-201ENST00000384897 85 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 SNORD41-201ENST00000386967 70 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 MTCO2P33-201ENST00000402100 465 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 DYNLT3P2-201ENST00000442517 295 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 HMGN2P32-201ENST00000444648 269 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
LDB1Q86U70 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms