Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATG4DQ86TL0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATG4DQ86TL0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4DQ86TL0 AC093831.2-201ENST00000624393 3427 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
ATG4DQ86TL0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4DQ86TL0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ATG4DQ86TL0 MIR340-201ENST00000362125 95 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 MIR342-201ENST00000362212 99 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 SNORD68-201ENST00000363214 84 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 Y_RNA.155-201ENST00000363632 101 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 Y_RNA.507-201ENST00000384500 99 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 MIR605-201ENST00000385078 83 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 RNU6-279P-201ENST00000391297 101 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 AL451046.2-201ENST00000403074 277 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 RNA5SP274-201ENST00000410484 108 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 SNORA18.7-201ENST00000516910 131 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 RNU6-341P-201ENST00000516973 96 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 MIR3618-201ENST00000580330 88 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 MIR5588-201ENST00000581890 63 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 AC006441.5-201ENST00000612680 209 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 AL359075.3-201ENST00000613288 217 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 AC091932.4-201ENST00000623386 200 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 AL355596.1-201ENST00000565399 3996 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4DQ86TL0 AL365361.1-201ENST00000566942 3481 ntBASIC2.77□□□□□ -1.97
ATG4DQ86TL0 AL035425.3-201ENST00000564206 4996 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
ATG4DQ86TL0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
ATG4DQ86TL0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.76□□□□□ -1.97
ATG4DQ86TL0 Y_RNA.10-201ENST00000362371 110 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 SNORA1B-201ENST00000362535 133 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 RNU6-832P-201ENST00000363319 107 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 RNU6-268P-201ENST00000364174 107 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 Y_RNA.360-201ENST00000365512 102 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 RNU6-1296P-201ENST00000383879 107 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 RNU6-979P-201ENST00000383896 107 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 RNU6-546P-201ENST00000383991 107 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 Y_RNA.437-201ENST00000384113 113 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ATG4DQ86TL0 AC123900.1-201ENST00000420390 96 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 SNX2P2-201ENST00000424553 323 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 AC093259.1-201ENST00000509755 300 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 AC008885.1-201ENST00000514930 301 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 RNU6-857P-201ENST00000515893 110 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 MIR3683-201ENST00000580847 82 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 AC006111.3-201ENST00000622137 383 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 AC091304.10-201ENST00000641554 121 ntBASIC2.76□□□□□ -1.97
ATG4DQ86TL0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ATG4DQ86TL0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.76□□□□□ -1.97
ATG4DQ86TL0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ATG4DQ86TL0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ATG4DQ86TL0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.75□□□□□ -1.97
ATG4DQ86TL0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATG4DQ86TL0 AC093908.1-201ENST00000623125 8092 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
ATG4DQ86TL0 MIR422A-201ENST00000362286 90 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 RNU6-442P-201ENST00000383968 104 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 RNU6-675P-201ENST00000384236 104 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 SNORA54-201ENST00000384281 123 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 AL049830.1-201ENST00000468034 425 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 AL049873.1-201ENST00000480540 376 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 RN7SL633P-201ENST00000488974 297 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 AP003484.1-201ENST00000530974 250 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.75□□□□□ -1.97
ATG4DQ86TL0 MIR4694-201ENST00000578534 80 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 MIR203B-201ENST00000636080 86 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 U6.108-201ENST00000637764 58 ntBASIC2.75□□□□□ -1.97
ATG4DQ86TL0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATG4DQ86TL0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATG4DQ86TL0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
ATG4DQ86TL0 MIR22-201ENST00000362190 85 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 SNORD14E-201ENST00000364009 85 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 MIR218-1-201ENST00000384999 110 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 RNU6-733P-201ENST00000410759 104 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 AL512326.2-201ENST00000426359 151 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 SNRPGP14-201ENST00000435400 219 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 EIF4BP1-201ENST00000554881 351 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 MIR4777-201ENST00000583710 86 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.74□□□□□ -1.97
ATG4DQ86TL0 AC007318.2-201ENST00000620999 243 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 AC006386.2-201ENST00000624491 75 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 AC012005.1-201ENST00000624575 75 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 AC095038.3-201ENST00000634439 195 ntBASIC2.74□□□□□ -1.97
ATG4DQ86TL0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATG4DQ86TL0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.74□□□□□ -1.97
ATG4DQ86TL0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
ATG4DQ86TL0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATG4DQ86TL0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.73□□□□□ -1.97
ATG4DQ86TL0 RNU6-363P-201ENST00000362895 105 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 RNU1-105P-201ENST00000363470 161 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 RNU6-409P-201ENST00000384114 104 ntBASIC2.73□□□□□ -1.97
ATG4DQ86TL0 RN7SKP220-201ENST00000410611 288 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms