Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 MIR4709-201ENST00000577272 72 ntBASIC2.37□□□□□ -2.03
RNF180Q86T96 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.37□□□□□ -2.03
RNF180Q86T96 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF180Q86T96 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RNF180Q86T96 ZNF355P-201ENST00000427301 3216 ntBASIC2.37□□□□□ -2.03
RNF180Q86T96 AC068700.1-201ENST00000565862 3754 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 RNU6-1080P-201ENST00000383982 107 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 AC009310.1-201ENST00000414414 451 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 MTND5P15-201ENST00000434246 349 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.36□□□□□ -2.03
RNF180Q86T96 Y_RNA.644-201ENST00000459006 113 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 Y_RNA.674-201ENST00000516362 113 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 SNORA31.17-201ENST00000516953 127 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 RNU6-182P-201ENST00000516970 105 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.36□□□□□ -2.03
RNF180Q86T96 AL929325.1-201ENST00000603096 117 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 MIR6845-201ENST00000613182 61 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 AL773524.1-201ENST00000614065 229 ntBASIC2.36□□□□□ -2.03
RNF180Q86T96 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF180Q86T96 RNU4-41P-201ENST00000364426 143 ntBASIC2.35□□□□□ -2.03
RNF180Q86T96 RNU4-17P-201ENST00000365598 141 ntBASIC2.35□□□□□ -2.03
RNF180Q86T96 HSPE1P9-201ENST00000440046 311 ntBASIC2.35□□□□□ -2.03
RNF180Q86T96 AL606517.2-201ENST00000442855 241 ntBASIC2.35□□□□□ -2.03
RNF180Q86T96 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF180Q86T96 HMGN1P7-201ENST00000491722 313 ntBASIC2.35□□□□□ -2.03
RNF180Q86T96 RNA5SP437-201ENST00000517249 129 ntBASIC2.35□□□□□ -2.03
RNF180Q86T96 IGLV3-17-201ENST00000519099 244 ntBASIC2.35□□□□□ -2.03
RNF180Q86T96 AC100767.1-201ENST00000528178 123 ntBASIC2.35□□□□□ -2.03
RNF180Q86T96 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF180Q86T96 AC121758.2-201ENST00000553271 193 ntBASIC2.35□□□□□ -2.03
RNF180Q86T96 RNU1-17P-201ENST00000363022 152 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 Y_RNA.242-201ENST00000364473 110 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 Y_RNA.308-201ENST00000365043 101 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 RNU6-360P-201ENST00000390944 104 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 RNA5SP496-201ENST00000391240 109 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 Y_RNA.793-201ENST00000411222 111 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 STAG3L5P-204ENST00000443759 179 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 RNY3P16-201ENST00000516338 101 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
RNF180Q86T96 RNU6-1020P-201ENST00000363684 107 ntBASIC2.33□□□□□ -2.04
RNF180Q86T96 RNU2-2P-201ENST00000410396 191 ntBASIC2.33□□□□□ -2.04
RNF180Q86T96 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.33□□□□□ -2.04
RNF180Q86T96 CYCSP49-201ENST00000420810 319 ntBASIC2.33□□□□□ -2.04
RNF180Q86T96 RNA5SP182-201ENST00000516064 82 ntBASIC2.33□□□□□ -2.04
RNF180Q86T96 AL137847.3-201ENST00000611521 109 ntBASIC2.33□□□□□ -2.04
RNF180Q86T96 AC004792.1-201ENST00000614523 137 ntBASIC2.33□□□□□ -2.04
RNF180Q86T96 Y_RNA.226-201ENST00000364337 114 ntBASIC2.32□□□□□ -2.04
RNF180Q86T96 Y_RNA.253-201ENST00000364562 112 ntBASIC2.32□□□□□ -2.04
RNF180Q86T96 MIR626-201ENST00000385032 94 ntBASIC2.32□□□□□ -2.04
RNF180Q86T96 MT-TR-201ENST00000387439 65 ntBASIC2.32□□□□□ -2.04
RNF180Q86T96 RPL30P13-201ENST00000418873 348 ntBASIC2.32□□□□□ -2.04
RNF180Q86T96 RNA5SP233-201ENST00000459153 113 ntBASIC2.32□□□□□ -2.04
RNF180Q86T96 RN7SKP164-201ENST00000516138 266 ntBASIC2.32□□□□□ -2.04
RNF180Q86T96 MIR4713-201ENST00000582691 75 ntBASIC2.32□□□□□ -2.04
RNF180Q86T96 AC098479.1-201ENST00000609225 154 ntBASIC2.32□□□□□ -2.04
RNF180Q86T96 RNU6-414P-201ENST00000363705 104 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 RNU6-923P-201ENST00000364753 107 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 Y_RNA.435-201ENST00000384095 112 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 RNU6-131P-201ENST00000391144 107 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 RNU6-918P-201ENST00000391219 106 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 SNRPGP10-201ENST00000432323 225 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF180Q86T96 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF180Q86T96 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF180Q86T96 AC108729.3-201ENST00000513484 108 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 MIR4299-201ENST00000577899 72 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 MIR4308-201ENST00000580634 81 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.31□□□□□ -2.04
RNF180Q86T96 AC087685.1-201ENST00000587507 141 ntBASIC2.31□□□□□ -2.04
RNF180Q86T96 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF180Q86T96 MIR126-201ENST00000362291 85 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 Y_RNA.24-201ENST00000362508 103 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 SNORD68-201ENST00000363214 84 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 RNU4-10P-201ENST00000364383 140 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 RNU6-47P-201ENST00000383866 107 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 RNU6-969P-201ENST00000383900 105 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 RNU6-1031P-201ENST00000384773 107 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 RNU6-493P-201ENST00000391321 108 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 PIGPP3-201ENST00000425307 415 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 RNU7-120P-201ENST00000459334 63 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 AP002392.1-201ENST00000537692 208 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 RPL23AP91-201ENST00000569211 455 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 AL591926.4-201ENST00000616895 298 ntBASIC2.3□□□□□ -2.04
RNF180Q86T96 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.3□□□□□ -2.04
RNF180Q86T96 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RNF180Q86T96 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RNF180Q86T96 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RNF180Q86T96 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RNF180Q86T96 AC080100.1-201ENST00000624239 5356 ntBASIC2.29□□□□□ -2.04
RNF180Q86T96 SNORA4.2-201ENST00000365313 147 ntBASIC2.29□□□□□ -2.04
RNF180Q86T96 RNU6-383P-201ENST00000410864 94 ntBASIC2.29□□□□□ -2.04
RNF180Q86T96 SNORA31.10-201ENST00000516482 106 ntBASIC2.29□□□□□ -2.04
RNF180Q86T96 AC072026.1-201ENST00000605023 201 ntBASIC2.29□□□□□ -2.04
RNF180Q86T96 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
RNF180Q86T96 Y_RNA.783-201ENST00000613546 102 ntBASIC2.29□□□□□ -2.04
RNF180Q86T96 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF180Q86T96 RNU6-661P-201ENST00000362409 107 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 RNU6-1209P-201ENST00000363655 107 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms