Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNU6-1228P-201ENST00000391014 107 ntBASIC2.33□□□□□ -2.04
UBE3BQ7Z3V4 RNA5SP496-201ENST00000391240 109 ntBASIC2.33□□□□□ -2.04
UBE3BQ7Z3V4 MIR548M-201ENST00000408260 86 ntBASIC2.33□□□□□ -2.04
UBE3BQ7Z3V4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.33□□□□□ -2.04
UBE3BQ7Z3V4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.33□□□□□ -2.04
UBE3BQ7Z3V4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.33□□□□□ -2.04
UBE3BQ7Z3V4 AC011604.1-201ENST00000545978 196 ntBASIC2.33□□□□□ -2.04
UBE3BQ7Z3V4 AL929325.1-201ENST00000603096 117 ntBASIC2.33□□□□□ -2.04
UBE3BQ7Z3V4 SNORA33-201ENST00000363664 130 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 RNA5SP138-201ENST00000365098 114 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 RNY3P5-201ENST00000384127 102 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 AC099677.2-201ENST00000436385 175 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 AC091021.1-201ENST00000468051 388 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 RNU1-142P-201ENST00000516682 145 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 AC109810.1-201ENST00000534066 224 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 MIR3144-201ENST00000579460 79 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 AC005786.1-201ENST00000588553 154 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 AL031274.2-201ENST00000599419 203 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBE3BQ7Z3V4 AC018630.2-201ENST00000534866 2403 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 RNU6-862P-201ENST00000362804 105 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 Y_RNA.170-201ENST00000363746 110 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 Y_RNA.580-201ENST00000391004 95 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 RNU6-482P-201ENST00000391068 107 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 HMGN2P38-201ENST00000423806 265 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 AC245047.8-201ENST00000456455 284 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 AL353997.5-201ENST00000618886 171 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 AC021753.1-201ENST00000635724 168 ntBASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBE3BQ7Z3V4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 AP006437.1-201ENST00000641440 3685 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 RNU4-84P-201ENST00000364200 139 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 Y_RNA.272-201ENST00000364696 102 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 MT-TT-201ENST00000387460 66 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 AL512604.1-201ENST00000404812 257 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 RNU6-1007P-201ENST00000516586 107 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 RNU6-341P-201ENST00000516973 96 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 SNORA31.25-201ENST00000517242 134 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 AL358944.1-201ENST00000528537 144 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 MIR4431-201ENST00000579990 94 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 MIR2681-201ENST00000581814 105 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 MIR6079-201ENST00000635807 62 ntBASIC2.3□□□□□ -2.04
UBE3BQ7Z3V4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 RNU1-17P-201ENST00000363022 152 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 SNORD115-3-201ENST00000363100 82 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 RNY1P5-201ENST00000383890 115 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 RNU6-804P-201ENST00000384286 107 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 MIR562-201ENST00000384894 95 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 AL606845.1-201ENST00000404881 255 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 MIR1283-2-201ENST00000408621 87 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 BX510359.4-201ENST00000423750 193 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 SEPT7P4-201ENST00000437076 306 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 RNU7-94P-201ENST00000459576 63 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 MIR8081-201ENST00000611533 95 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 AC084768.2-201ENST00000622736 221 ntBASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UBE3BQ7Z3V4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 RNU4-41P-201ENST00000364426 143 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 Y_RNA.506-201ENST00000384494 102 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 RNU6-125P-201ENST00000384505 107 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 SNORA8-201ENST00000384574 139 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 RNU4-43P-201ENST00000410628 137 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 MTND2P29-201ENST00000438595 412 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 AL392103.1-201ENST00000447000 198 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 AL163195.1-201ENST00000496941 348 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 RNU7-121P-201ENST00000516604 62 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 Y_RNA.703-201ENST00000516846 111 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 AC104465.1-201ENST00000611365 139 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.28□□□□□ -2.04
UBE3BQ7Z3V4 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 RNU4-52P-201ENST00000384209 138 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 MIR518A2-201ENST00000384966 87 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 RNA5SP323-201ENST00000391094 133 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 RNA5SP465-201ENST00000391195 109 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 HMGN2P39-201ENST00000398005 273 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 SNORD11-201ENST00000459124 84 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 RNU7-200P-201ENST00000516105 62 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 MIR4448-201ENST00000584360 86 ntBASIC2.27□□□□□ -2.05
UBE3BQ7Z3V4 MIR6840-201ENST00000611937 71 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 238.5 ms