Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 AC104332.1-201ENST00000440471 797 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 MTND4LP30-201ENST00000454092 297 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 AC093850.1-201ENST00000454121 251 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 HMGN1P7-201ENST00000491722 313 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 RNU6-191P-201ENST00000516295 94 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 AC024405.2-202ENST00000532731 184 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 AC127455.1-201ENST00000565496 145 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 MIR548AY-201ENST00000617669 107 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 SNORA2.2-201ENST00000365473 135 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 RNU6-163P-201ENST00000384396 106 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 MIR522-201ENST00000385071 87 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 AC117454.1-201ENST00000491120 168 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 MRPS35P2-201ENST00000508242 191 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 RNA5SP458-201ENST00000516188 119 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 AC090049.2-201ENST00000550377 109 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 MIR3664-201ENST00000579074 99 ntBASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.3□□□□□ -2.2
NUP54Q7Z3B4 MIR378A-201ENST00000362177 66 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 RNU6-801P-201ENST00000364087 105 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 U8.7-201ENST00000364940 136 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 SNORA72.4-201ENST00000384174 132 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 AL731563.1-201ENST00000442202 214 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 AP003072.1-201ENST00000531740 145 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 AL442663.2-201ENST00000554385 511 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.29□□□□□ -2.2
NUP54Q7Z3B4 RNA5SP432-201ENST00000362480 116 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 snoU2_19.2-201ENST00000363024 80 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.203-201ENST00000364106 102 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 RNU6-806P-201ENST00000365147 105 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 SNORA53-201ENST00000391141 249 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 RPL21P38-201ENST00000418090 167 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 BTF3P4-201ENST00000418852 495 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 MTCO1P5-201ENST00000433573 344 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 RNU7-95P-201ENST00000459222 64 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 RNU7-141P-201ENST00000459304 62 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 RPL23AP54-201ENST00000495129 419 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 AC114811.1-201ENST00000507207 168 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 RNU6-322P-201ENST00000516010 103 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 RNU6-917P-201ENST00000516294 104 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 RNU2-31P-201ENST00000516954 155 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.714-201ENST00000517065 90 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 AP003733.2-201ENST00000529409 171 ntBASIC1.28□□□□□ -2.2
NUP54Q7Z3B4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.326-201ENST00000365176 113 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 RNU6-326P-201ENST00000365480 107 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.541-201ENST00000384640 113 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 AP1B1P2-201ENST00000416196 106 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 PIGPP3-201ENST00000425307 415 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 SNRPGP10-201ENST00000432323 225 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 AC009474.2-201ENST00000451383 136 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 AC098869.1-201ENST00000481627 292 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 RNU6-922P-201ENST00000516753 99 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 AC037487.3-201ENST00000606668 112 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.27□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.26-201ENST00000362539 101 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 Y_RNA.64-201ENST00000362845 102 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 SNORA63-201ENST00000363450 132 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 RNU6-969P-201ENST00000383900 105 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 MIR215-201ENST00000384858 110 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 RNU6-131P-201ENST00000391144 107 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 SNORA26.5-201ENST00000391215 123 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 AL451046.2-201ENST00000403074 277 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 RNU2-14P-201ENST00000411053 191 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 MLLT10P1-201ENST00000418346 262 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 AC006504.6-201ENST00000590142 199 ntBASIC1.26□□□□□ -2.21
NUP54Q7Z3B4 SNORA25.1-201ENST00000362326 128 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 RNU6-674P-201ENST00000363831 107 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 RNU6-1048P-201ENST00000364054 107 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 MIR452-201ENST00000385020 85 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 SNORD41-201ENST00000386967 70 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 SNORA36B-201ENST00000410438 131 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 HMGN2P32-201ENST00000444648 269 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 RNU6-437P-201ENST00000459408 95 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 RNU6-165P-201ENST00000517170 99 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 MIR2681-201ENST00000581814 105 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 AL512605.2-201ENST00000592972 256 ntBASIC1.25□□□□□ -2.21
NUP54Q7Z3B4 JPX_2.1-201ENST00000614161 69 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms