Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 AC007671.2-201ENST00000637344 619 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU4-21P-201ENST00000362802 126 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 SNORD115-41-201ENST00000363608 82 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU6-740P-201ENST00000364734 105 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.69□□□□□ -2.52
USP54Q70EL1 MTATP6P23-201ENST00000440153 476 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.69□□□□□ -2.52
USP54Q70EL1 MTATP6P14-201ENST00000455189 673 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU6-329P-201ENST00000459618 107 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 MTCO2P30-201ENST00000503662 364 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU2-13P-201ENST00000515909 113 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 RNU7-181P-201ENST00000517234 74 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 AC006600.1-201ENST00000572529 153 ntBASIC-0.69□□□□□ -2.52
USP54Q70EL1 AC106754.1-201ENST00000562632 1513 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 MIR410-201ENST00000362222 80 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 RNU6-454P-201ENST00000364292 107 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 RNU4-66P-201ENST00000365199 138 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 MTCO2P27-201ENST00000420740 428 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 SNRPGP10-201ENST00000432323 225 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 AL356010.1-201ENST00000456364 102 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 snoU13.2-201ENST00000459201 104 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 CR383656.4-201ENST00000546909 122 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 MIR3681-201ENST00000580089 72 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 AC011458.1-201ENST00000604034 617 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 Z94722.1-201ENST00000604328 474 ntBASIC-0.7□□□□□ -2.52
USP54Q70EL1 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 RNU6-996P-201ENST00000365438 107 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 MIR601-201ENST00000385256 79 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 RPL21P38-201ENST00000418090 167 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 MTCO2P16-201ENST00000436962 677 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
USP54Q70EL1 NAMPTP3-201ENST00000569273 224 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 AC090617.3-201ENST00000573670 475 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 AL670379.3-201ENST00000605040 251 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.71□□□□□ -2.52
USP54Q70EL1 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 MIR873-201ENST00000401120 77 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.72□□□□□ -2.52
USP54Q70EL1 USMG5P1-201ENST00000425964 177 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 RPL30P10-201ENST00000488148 337 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 RNA5SP47-201ENST00000517230 109 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 MIR548AD-201ENST00000584780 82 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 POLR3GP2-201ENST00000588366 668 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 POLR3GP1-201ENST00000594073 261 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 AC005609.4-201ENST00000625071 447 ntBASIC-0.72□□□□□ -2.52
USP54Q70EL1 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.72□□□□□ -2.53
USP54Q70EL1 SNORA26.5-201ENST00000391215 123 ntBASIC-0.72□□□□□ -2.53
USP54Q70EL1 MIR1257-201ENST00000408490 117 ntBASIC-0.72□□□□□ -2.53
USP54Q70EL1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.72□□□□□ -2.53
USP54Q70EL1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.72□□□□□ -2.53
USP54Q70EL1 AC005972.2-201ENST00000604690 348 ntBASIC-0.72□□□□□ -2.53
USP54Q70EL1 AL158050.2-201ENST00000605336 568 ntBASIC-0.72□□□□□ -2.53
USP54Q70EL1 AC016597.2-201ENST00000613256 341 ntBASIC-0.72□□□□□ -2.53
USP54Q70EL1 AC072046.2-201ENST00000618366 268 ntBASIC-0.72□□□□□ -2.53
USP54Q70EL1 MIR101-2-201ENST00000362195 79 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 RNU6-161P-201ENST00000363051 106 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 SNORD28-201ENST00000384706 75 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 AC090844.1-201ENST00000422019 156 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 MTCYBP8-201ENST00000422855 651 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 RNU7-180P-201ENST00000459240 63 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 AC107297.1-201ENST00000459991 176 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 PRDX4P1-201ENST00000507189 574 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 MIR198-201ENST00000637333 62 ntBASIC-0.73□□□□□ -2.53
USP54Q70EL1 SNORD113-6-201ENST00000363345 75 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 SNX3P1X-201ENST00000414887 175 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 SNORA31.14-201ENST00000516728 116 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 AC093023.1-201ENST00000547375 507 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 MIR3925-201ENST00000584674 77 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 AC006380.1-201ENST00000603598 186 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 AL442067.1-201ENST00000613261 223 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 AL354950.2-201ENST00000617939 290 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 MIR6740-201ENST00000618268 113 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 AC244669.1-204ENST00000621564 178 ntBASIC-0.74□□□□□ -2.53
USP54Q70EL1 SNORD14E-201ENST00000364009 85 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 SNORA75.4-201ENST00000391278 119 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 AC236972.2-201ENST00000434979 310 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 AC114755.3-201ENST00000481111 251 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.75□□□□□ -2.53
USP54Q70EL1 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 RNU6-958P-201ENST00000516995 106 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 AC092807.2-201ENST00000609367 243 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.75□□□□□ -2.53
USP54Q70EL1 SNORD93-201ENST00000408813 74 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms