Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC074050.1-201ENST00000563247 211 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 U1.36-201ENST00000620684 176 ntBASIC1.98□□□□□ -2.09
PTCHD4Q6ZW05 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 AL136360.1-201ENST00000503377 1900 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 MIR126-201ENST00000362291 85 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 Y_RNA.23-201ENST00000362496 106 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 Y_RNA.111-201ENST00000363248 100 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-312P-201ENST00000364629 107 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-1062P-201ENST00000383908 107 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 SNORA12.1-201ENST00000390873 148 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-440P-201ENST00000390882 105 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 NDUFB4P4-201ENST00000404822 243 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 Y_RNA.622-201ENST00000411091 108 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 MLLT10P1-201ENST00000418346 262 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 SEPT7P4-201ENST00000437076 306 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 AL121914.1-201ENST00000450188 156 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 MIR3162-201ENST00000581818 82 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 AC104465.1-201ENST00000611365 139 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 uc_338.4-201ENST00000616635 176 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
PTCHD4Q6ZW05 RNU6-112P-201ENST00000363599 104 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 Y_RNA.265-201ENST00000364677 108 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 SNORA4.2-201ENST00000365313 147 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-728P-201ENST00000365375 104 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 RNY3P5-201ENST00000384127 102 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 Y_RNA.464-201ENST00000384282 110 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 MIR520A-201ENST00000384862 85 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 SNORA48.3-201ENST00000391081 134 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 RNU2-7P-201ENST00000410794 178 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 AC244636.1-201ENST00000421152 228 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 HSPE1P9-201ENST00000440046 311 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 AC023449.1-201ENST00000454464 154 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 NDUFA4P2-201ENST00000489989 244 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 SNORA31.10-201ENST00000516482 106 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP437-201ENST00000517249 129 ntBASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PTCHD4Q6ZW05 SNORD68-201ENST00000363214 84 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-296P-201ENST00000384608 107 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 MIR15B-201ENST00000385045 98 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-1135P-201ENST00000411083 103 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 STAG3L5P-204ENST00000443759 179 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 RPL23AP63-201ENST00000498752 471 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP200-201ENST00000516360 103 ntBASIC1.95□□□□□ -2.1
PTCHD4Q6ZW05 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 SNORD45.3-201ENST00000363836 72 ntBASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 Y_RNA.441-201ENST00000384123 112 ntBASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 SNRPGP8-201ENST00000454064 226 ntBASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 MIR4431-201ENST00000579990 94 ntBASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
PTCHD4Q6ZW05 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 Y_RNA.8-201ENST00000362353 102 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 Y_RNA.357-201ENST00000365487 109 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-804P-201ENST00000384286 107 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 MIR522-201ENST00000385071 87 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-131P-201ENST00000391144 107 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP482-201ENST00000391269 118 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-394P-201ENST00000410735 107 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 SNORD77.4-201ENST00000516158 81 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 RNU7-149P-201ENST00000516739 59 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-255P-201ENST00000516957 105 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-1212P-201ENST00000517023 104 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 AC021753.1-201ENST00000635724 168 ntBASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PTCHD4Q6ZW05 RNU4-84P-201ENST00000364200 139 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 Y_RNA.272-201ENST00000364696 102 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 RN7SKP200-201ENST00000410564 320 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 FTH1P12-201ENST00000432137 551 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 OR9P1P-201ENST00000496431 281 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 AC005840.1-201ENST00000498412 377 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 RNU7-28P-201ENST00000516759 62 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 AC091544.4-201ENST00000555268 342 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 MIR3144-201ENST00000579460 79 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 Pinc.1-201ENST00000616452 154 ntBASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms