Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SNORA67.5-201ENST00000391036 107 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 MTCO1P5-201ENST00000433573 344 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 RPS27P1-201ENST00000450552 247 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 AC099513.1-201ENST00000490423 301 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 SNORD116-28-201ENST00000516123 91 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 AC027419.1-201ENST00000522976 328 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 AC009779.6-201ENST00000603972 165 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 AC022217.4-201ENST00000604389 163 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 AC022441.3-201ENST00000605737 136 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 AC004467.1-201ENST00000615678 330 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 U2.14-201ENST00000615943 113 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 AC073349.3-201ENST00000617616 186 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 MIR3674-201ENST00000636576 68 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 U6.108-201ENST00000637764 58 ntBASIC1.37□□□□□ -2.19
NHLRC1Q6VVB1 RNU4-90P-201ENST00000362773 141 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.65-201ENST00000362846 100 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 RNU4-13P-201ENST00000364019 141 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-740P-201ENST00000364734 105 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 SNORA20.1-201ENST00000364790 130 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.352-201ENST00000365439 102 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 MIR320A-201ENST00000385302 82 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 RN7SKP51-201ENST00000410781 304 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 RPL30P13-201ENST00000418873 348 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 SNORD13-201ENST00000459299 104 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 AC097462.1-201ENST00000514125 324 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 RNU2-56P-201ENST00000516826 190 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 RNU2-12P-201ENST00000517216 168 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 AC073413.2-201ENST00000604332 360 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 AC021506.2-201ENST00000612354 169 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 AL078604.3-201ENST00000615580 211 ntBASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
NHLRC1Q6VVB1 SNORD114-7-201ENST00000362520 77 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.54-201ENST00000362766 105 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-407P-201ENST00000365280 104 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 SNORA20B-201ENST00000384220 132 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-376P-201ENST00000384731 106 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-847P-201ENST00000411115 108 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 Z98949.2-201ENST00000440996 144 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 AC091959.1-201ENST00000495857 238 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 RNA5SP20-201ENST00000515976 84 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 SNORA70.12-201ENST00000516084 153 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 RNU7-110P-201ENST00000516891 62 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 AC005176.2-201ENST00000596933 147 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 DEFB117-201ENST00000602356 141 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 SNORD113-5-201ENST00000607261 78 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 AC011373.1-201ENST00000607270 237 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 MIR8065-201ENST00000620577 100 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 MIR6079-201ENST00000635807 62 ntBASIC1.35□□□□□ -2.19
NHLRC1Q6VVB1 RNU4-80P-201ENST00000363200 141 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.136-201ENST00000363444 102 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.217-201ENST00000364214 105 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.230-201ENST00000364348 109 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-200P-201ENST00000364743 107 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-60P-201ENST00000364792 103 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-662P-201ENST00000384253 104 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.552-201ENST00000384665 112 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.569-201ENST00000384749 103 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 PCNPP3-201ENST00000393579 471 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 MIR548H3-201ENST00000408771 118 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 Y_RNA.641-201ENST00000459414 105 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 SEPT14P8-201ENST00000508026 178 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 TRMT112P2-201ENST00000512910 132 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 RNU6-436P-201ENST00000516171 114 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 SNORD3E-202ENST00000627253 216 ntBASIC1.34□□□□□ -2.19
NHLRC1Q6VVB1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 UBE2WP1-201ENST00000362030 340 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 SNORA27.1-201ENST00000362604 124 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 Y_RNA.44-201ENST00000362676 108 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 Y_RNA.122-201ENST00000363331 96 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 RNU1-22P-201ENST00000363334 158 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 RNU6-457P-201ENST00000363999 107 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 SNORD115-30-201ENST00000364117 82 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 SNORA25.9-201ENST00000365087 128 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 RNU6-326P-201ENST00000365480 107 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 RNU6-47P-201ENST00000383866 107 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 Y_RNA.478-201ENST00000384358 107 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 SNORA17.3-201ENST00000391159 129 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 MIR873-201ENST00000401120 77 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 RNU2-54P-201ENST00000410299 190 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 RNU6-321P-201ENST00000410912 106 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 BTF3P4-201ENST00000418852 495 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 RPS27P16-201ENST00000425758 201 ntBASIC1.33□□□□□ -2.2
NHLRC1Q6VVB1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms