Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SNORD115-35-201ENST00000365122 82 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 MIR570-201ENST00000384917 97 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 MTATP6P18-201ENST00000417994 673 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 AC087683.1-201ENST00000591187 441 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 AL391834.2-201ENST00000609982 546 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 SNORD115-23-201ENST00000364461 82 ntBASIC-1.03□□□□□ -2.58
VPS13DQ5THJ4 MTND1P27-201ENST00000451117 902 ntBASIC-1.03□□□□□ -2.58
VPS13DQ5THJ4 AC119751.4-201ENST00000507498 357 ntBASIC-1.03□□□□□ -2.58
VPS13DQ5THJ4 SNORA24-201ENST00000384096 131 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 RNU6-107P-201ENST00000516643 102 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 RNA5SP272-201ENST00000516095 111 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 MIR5704-201ENST00000584029 77 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 AC099654.8-201ENST00000637757 681 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 SNORD68-201ENST00000363214 84 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 AL512286.1-201ENST00000439244 400 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 AC022893.3-201ENST00000607665 437 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 U6.42-201ENST00000618440 107 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 AC026585.1-201ENST00000619582 524 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 AC068880.4-201ENST00000623082 495 ntBASIC-1.04□□□□□ -2.58
VPS13DQ5THJ4 RNA5SP93-201ENST00000362525 114 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 MIR617-201ENST00000385030 97 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 MIR664B-201ENST00000626756 61 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNA5SP245-201ENST00000364239 121 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU6-973P-201ENST00000364690 107 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 AC084290.1-201ENST00000434995 374 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 SNORD123-201ENST00000459473 70 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 POLR3GP1-201ENST00000594073 261 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 AC005776.1-201ENST00000603164 290 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 MIR15A-201ENST00000607334 83 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 AL354696.1-201ENST00000614652 497 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 MIR548H3-201ENST00000408771 118 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU2-10P-201ENST00000516375 211 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU6-412P-201ENST00000516434 106 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 MTND5P34-201ENST00000568888 325 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 SNORA2.1-201ENST00000363089 137 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU6-154P-201ENST00000384306 106 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU2-62P-201ENST00000410868 191 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 RNU6-885P-201ENST00000516607 104 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 MIR548AC-201ENST00000585049 88 ntBASIC-1.05□□□□□ -2.58
VPS13DQ5THJ4 SNORD115-13-201ENST00000363358 82 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 AC073464.1-201ENST00000429823 534 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 RNU7-104P-201ENST00000459398 79 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 MIR4491-201ENST00000581087 68 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 RNU6-839P-201ENST00000363347 108 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 MTND3P13-201ENST00000574391 343 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 MTND4P18-201ENST00000447010 465 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 AC026414.1-201ENST00000504046 698 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 MIR4473-201ENST00000583731 91 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 Z94722.1-201ENST00000604328 474 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 SNORD115-40-201ENST00000606510 82 ntBASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.06□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 MIR507-201ENST00000385234 94 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 MTATP6P13-201ENST00000438531 667 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 RNU7-134P-201ENST00000458997 64 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 MTCO2P6-201ENST00000463134 685 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 AC108019.1-201ENST00000512540 175 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 RNU6-553P-201ENST00000364047 96 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 MIR548A2-201ENST00000384956 97 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 BX119904.4-201ENST00000424402 301 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 SNAP23P1-201ENST00000433229 246 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 RNU7-13P-201ENST00000516413 62 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 AL022154.1-201ENST00000604698 785 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 RNU6-740P-201ENST00000364734 105 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 RNU6-905P-201ENST00000384434 107 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 AL008987.1-201ENST00000415528 237 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 MTCO2P11-201ENST00000431069 680 ntBASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
VPS13DQ5THJ4 MIR548AM-201ENST00000584298 74 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms