Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.4□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-56P-201ENST00000516986 93 ntBASIC3.4□□□□□ -1.87
TMEM259Q4ZIN3 AC245166.1-201ENST00000521012 253 ntBASIC3.4□□□□□ -1.87
TMEM259Q4ZIN3 MIR4778-201ENST00000577635 80 ntBASIC3.4□□□□□ -1.87
TMEM259Q4ZIN3 MIR7112-201ENST00000616126 65 ntBASIC3.4□□□□□ -1.87
TMEM259Q4ZIN3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-349P-201ENST00000362402 107 ntBASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 SNORD56.3-201ENST00000363507 71 ntBASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 RNY1P6-201ENST00000384193 109 ntBASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 AC021205.2-201ENST00000480069 347 ntBASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 RNA5SP385-201ENST00000515947 110 ntBASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 RNY4P20-201ENST00000516678 93 ntBASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 RNA5SP137-201ENST00000516833 135 ntBASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
TMEM259Q4ZIN3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-640P-201ENST00000363693 105 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 Y_RNA.198-201ENST00000364013 98 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 Y_RNA.213-201ENST00000364178 111 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-1131P-201ENST00000364955 107 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 Y_RNA.388-201ENST00000383919 113 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 Y_RNA.454-201ENST00000384224 113 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-950P-201ENST00000384651 107 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 SNX2P2-201ENST00000424553 323 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 RN7SKP57-201ENST00000517248 293 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 MIR4276-201ENST00000584832 70 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 AC022149.2-201ENST00000621061 203 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 AC106754.2-201ENST00000623006 233 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 AC027279.3-201ENST00000625055 122 ntBASIC3.38□□□□□ -1.87
TMEM259Q4ZIN3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 MIRLET7C-201ENST00000362160 84 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 SNORA25.6-201ENST00000364121 118 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 Y_RNA.348-201ENST00000365403 103 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-49P-201ENST00000384256 107 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-424P-201ENST00000384367 105 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 AL627390.1-201ENST00000396055 340 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 HSPE1P9-201ENST00000440046 311 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-844P-201ENST00000517175 102 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 SUMO2P16-201ENST00000519475 264 ntBASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM259Q4ZIN3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 Y_RNA.85-201ENST00000363014 111 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 RNY4P6-201ENST00000363667 96 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 Y_RNA.241-201ENST00000364470 117 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 RN7SKP123-201ENST00000410732 291 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 RNU2-7P-201ENST00000410794 178 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 HMGN2P3-201ENST00000433603 273 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 HMGN2P5-201ENST00000436882 273 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 AC115115.1-201ENST00000449927 248 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 RNU7-164P-201ENST00000459221 62 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-762P-201ENST00000517107 102 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 FAM35CP-201ENST00000554755 2470 ntBASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM259Q4ZIN3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 AL589743.1-201ENST00000551932 2712 ntBASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 SNORA63.5-201ENST00000363548 123 ntBASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 RNU6-414P-201ENST00000363705 104 ntBASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 SNORA38.1-201ENST00000364172 131 ntBASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 U8.6-201ENST00000364939 135 ntBASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 U8.16-201ENST00000391279 133 ntBASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 AC015922.2-201ENST00000435593 184 ntBASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 RNU7-12P-201ENST00000516030 62 ntBASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 AL035425.3-201ENST00000564206 4996 ntBASIC3.35□□□□□ -1.87
TMEM259Q4ZIN3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 Y_RNA.298-201ENST00000364960 107 ntBASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 MIR181B1-201ENST00000385240 110 ntBASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 RNA5SP168-201ENST00000516642 112 ntBASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 MIR5680-201ENST00000577577 84 ntBASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 AC002984.1-201ENST00000591692 448 ntBASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 MIR8057-201ENST00000620957 69 ntBASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 AC091932.4-201ENST00000623386 200 ntBASIC3.34□□□□□ -1.87
TMEM259Q4ZIN3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TMEM259Q4ZIN3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TMEM259Q4ZIN3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
TMEM259Q4ZIN3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM259Q4ZIN3 SNORA4.2-201ENST00000365313 147 ntBASIC3.33□□□□□ -1.88
TMEM259Q4ZIN3 SNORA27-201ENST00000384323 126 ntBASIC3.33□□□□□ -1.88
TMEM259Q4ZIN3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.33□□□□□ -1.88
TMEM259Q4ZIN3 RN7SL504P-201ENST00000494496 287 ntBASIC3.33□□□□□ -1.88
TMEM259Q4ZIN3 RNVU1-2-201ENST00000516326 135 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms