Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL353997.5-201ENST00000618886 171 ntBASIC2.43□□□□□ -2.02
CCDC144BQ3MJ40 AL513423.1-201ENST00000621695 132 ntBASIC2.43□□□□□ -2.02
CCDC144BQ3MJ40 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 Y_RNA.76-201ENST00000362931 109 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 RNY1-201ENST00000364228 113 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 Y_RNA.242-201ENST00000364473 110 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 Y_RNA.269-201ENST00000364685 89 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 RNU6-338P-201ENST00000383888 105 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 Y_RNA.515-201ENST00000384535 112 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 MIR1267-201ENST00000408723 78 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 HMGN2P19-201ENST00000425149 265 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 AL445646.1-201ENST00000431784 216 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 MIR4762-201ENST00000585261 75 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 AC087685.1-201ENST00000587507 141 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 AC021506.2-201ENST00000612354 169 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 AC141273.2-201ENST00000618989 130 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 AL359851.1-201ENST00000569460 4997 ntBASIC2.42□□□□□ -2.02
CCDC144BQ3MJ40 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 RNU6-1123P-201ENST00000362347 106 ntBASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 SNORD68-201ENST00000363214 84 ntBASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 U8.5-201ENST00000364528 136 ntBASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 U8.13-201ENST00000390842 128 ntBASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 SNRPGP10-201ENST00000432323 225 ntBASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 Z98949.2-201ENST00000440996 144 ntBASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 AL021397.1-201ENST00000451806 248 ntBASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 AL365265.1-201ENST00000621045 234 ntBASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC144BQ3MJ40 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC144BQ3MJ40 RNU6-379P-201ENST00000363813 104 ntBASIC2.4□□□□□ -2.03
CCDC144BQ3MJ40 RNY4P28-201ENST00000365281 93 ntBASIC2.4□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-969P-201ENST00000383900 105 ntBASIC2.4□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-131P-201ENST00000391144 107 ntBASIC2.4□□□□□ -2.03
CCDC144BQ3MJ40 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC144BQ3MJ40 AC100767.1-201ENST00000528178 123 ntBASIC2.4□□□□□ -2.03
CCDC144BQ3MJ40 AC103810.8-201ENST00000607347 118 ntBASIC2.4□□□□□ -2.03
CCDC144BQ3MJ40 MIR424-201ENST00000362227 98 ntBASIC2.39□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-1209P-201ENST00000363655 107 ntBASIC2.39□□□□□ -2.03
CCDC144BQ3MJ40 MIR626-201ENST00000385032 94 ntBASIC2.39□□□□□ -2.03
CCDC144BQ3MJ40 MIR30A-201ENST00000385092 71 ntBASIC2.39□□□□□ -2.03
CCDC144BQ3MJ40 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.39□□□□□ -2.03
CCDC144BQ3MJ40 RNU2-2P-201ENST00000410396 191 ntBASIC2.39□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-847P-201ENST00000411115 108 ntBASIC2.39□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-295P-201ENST00000516901 104 ntBASIC2.39□□□□□ -2.03
CCDC144BQ3MJ40 Y_RNA.796-201ENST00000364268 102 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 Y_RNA.799-201ENST00000364992 102 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 RNA5SP37-201ENST00000365420 130 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 MIR522-201ENST00000385071 87 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 MIR676-201ENST00000390702 67 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 SNORA48.3-201ENST00000391081 134 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 MLLT10P1-201ENST00000418346 262 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 CYCTP-201ENST00000504253 315 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 SNORD116-28-201ENST00000516123 91 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 RPL23AP91-201ENST00000569211 455 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 MIR3198-2-201ENST00000577868 80 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 AC027279.3-201ENST00000625055 122 ntBASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC144BQ3MJ40 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-424P-201ENST00000384367 105 ntBASIC2.37□□□□□ -2.03
CCDC144BQ3MJ40 AC099513.1-201ENST00000490423 301 ntBASIC2.37□□□□□ -2.03
CCDC144BQ3MJ40 RNA5SP168-201ENST00000516642 112 ntBASIC2.37□□□□□ -2.03
CCDC144BQ3MJ40 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC144BQ3MJ40 MIR4448-201ENST00000584360 86 ntBASIC2.37□□□□□ -2.03
CCDC144BQ3MJ40 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC144BQ3MJ40 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-1084P-201ENST00000362498 107 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-439P-201ENST00000384188 106 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 SNORA26.9-201ENST00000391322 122 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 RNU2-40P-201ENST00000410833 196 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-383P-201ENST00000410864 94 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 RN7SKP101-201ENST00000411376 320 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 AC004965.1-201ENST00000413033 213 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 HMGN2P38-201ENST00000423806 265 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 AC025033.1-201ENST00000463883 194 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 AC009779.6-201ENST00000603972 165 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 AC011921.3-201ENST00000605540 361 ntBASIC2.36□□□□□ -2.03
CCDC144BQ3MJ40 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 Y_RNA.24-201ENST00000362508 103 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 Y_RNA.199-201ENST00000364014 102 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 Y_RNA.200-201ENST00000364018 102 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 snoU2-30.1-201ENST00000365012 70 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 MIR194-1-201ENST00000384892 85 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 MIR660-201ENST00000385235 97 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 Y_RNA.626-201ENST00000411288 95 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 snoU13.9-201ENST00000458927 103 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 AC120024.3-201ENST00000603167 156 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 SNORD3E-202ENST00000627253 216 ntBASIC2.35□□□□□ -2.03
CCDC144BQ3MJ40 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 RNU4-17P-201ENST00000365598 141 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 RNU6-163P-201ENST00000384396 106 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 SNORA12.1-201ENST00000390873 148 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 U8.16-201ENST00000391279 133 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 MIR1298-201ENST00000408783 112 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 RNA5SP489-201ENST00000410986 109 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms