Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 AC018630.2-201ENST00000534866 2403 ntBASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 AP003122.5-201ENST00000527668 3766 ntBASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 SNORD115-27-201ENST00000364430 82 ntBASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 MIR3074-201ENST00000384885 81 ntBASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 RNU6-523P-201ENST00000516304 54 ntBASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 RNU6-539P-201ENST00000516665 103 ntBASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 AL358944.1-201ENST00000528537 144 ntBASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 MIR4738-201ENST00000579134 87 ntBASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 AL512310.12-203ENST00000640543 90 ntBASIC3.1□□□□□ -1.91
RSPO4Q2I0M5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 RNU6-1313P-201ENST00000362622 102 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 RNU6-268P-201ENST00000364174 107 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 SNORA1.1-201ENST00000364671 133 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 RNU11-5P-201ENST00000391216 129 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 AL627390.1-201ENST00000396055 340 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 MIR1253-201ENST00000408273 105 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 RNU6-1186P-201ENST00000410429 97 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 RN7SKP220-201ENST00000410611 288 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 Z98742.3-201ENST00000418637 326 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 SNX2P2-201ENST00000424553 323 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 AL035398.1-201ENST00000430869 322 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 RPS15AP28-201ENST00000435088 386 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 AC087499.4-201ENST00000448505 178 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 AC125388.1-201ENST00000459631 156 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 AC026333.2-201ENST00000542164 106 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 uc_338.14-201ENST00000613162 166 ntBASIC3.09□□□□□ -1.91
RSPO4Q2I0M5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.09□□□□□ -1.92
RSPO4Q2I0M5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 MIR342-201ENST00000362212 99 ntBASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 SNORD14E-201ENST00000364009 85 ntBASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 Y_RNA.267-201ENST00000364679 109 ntBASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 SNRPGP14-201ENST00000435400 219 ntBASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 VWA8P1-201ENST00000510889 176 ntBASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 AC093729.1-201ENST00000513074 128 ntBASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 U2.20-201ENST00000613956 192 ntBASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 AL110115.1-201ENST00000614396 364 ntBASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 MIR376B-201ENST00000614515 100 ntBASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RSPO4Q2I0M5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 RNU6-315P-201ENST00000362666 107 ntBASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 SNORD6-201ENST00000365444 73 ntBASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 MIR196B-201ENST00000384852 84 ntBASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 AP000567.1-201ENST00000406413 156 ntBASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 AC097463.2-201ENST00000421074 142 ntBASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 RNA5SP310-201ENST00000459084 116 ntBASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 RNU6-341P-201ENST00000516973 96 ntBASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 RNU6-86P-201ENST00000606534 107 ntBASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 MIR7111-201ENST00000619751 72 ntBASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
RSPO4Q2I0M5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 RNA5SP295-201ENST00000362655 121 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 Y_RNA.340-201ENST00000365330 92 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 RNU6-1274P-201ENST00000384557 107 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 MIR519C-201ENST00000385053 87 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 SNORD77B-201ENST00000391112 67 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 POLR2J4-204ENST00000418424 324 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 AC090844.1-201ENST00000422019 156 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 AL161932.1-201ENST00000437408 146 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 snoU13.15-201ENST00000459407 104 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 AC108729.3-201ENST00000513484 108 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 RNU7-99P-201ENST00000516271 62 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 MIR5047-201ENST00000579212 100 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 AC021613.1-201ENST00000623880 111 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
RSPO4Q2I0M5 AC008264.2-201ENST00000610193 3731 ntBASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 U8.2-201ENST00000363156 134 ntBASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 RPS12P2-201ENST00000439728 269 ntBASIC3.05□□□□□ -1.92
RSPO4Q2I0M5 AC093259.1-201ENST00000509755 300 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms