Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RNU6-1318P-201ENST00000365389 103 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 RNU6-1080P-201ENST00000383982 107 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 SNORA26.9-201ENST00000391322 122 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 AL034345.1-201ENST00000407768 123 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.67□□□□□ -2.14
EFNB3Q15768 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.67□□□□□ -2.14
EFNB3Q15768 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.67□□□□□ -2.14
EFNB3Q15768 SNORD116-28-201ENST00000516123 91 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 RNU6-295P-201ENST00000516901 104 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 MIR4724-201ENST00000579485 89 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 MIR5089-201ENST00000580047 84 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 MIR4524B-201ENST00000581569 115 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 MIR4713-201ENST00000582691 75 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 AL929325.1-201ENST00000603096 117 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 AC011921.3-201ENST00000605540 361 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 Y_RNA.802-201ENST00000614892 130 ntBASIC1.67□□□□□ -2.14
EFNB3Q15768 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
EFNB3Q15768 MIR367-201ENST00000362299 68 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 Y_RNA.262-201ENST00000364641 102 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 SNORA8.3-201ENST00000384679 139 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 MIR583-201ENST00000384846 75 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
EFNB3Q15768 AL591806.2-201ENST00000433122 173 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 AC108059.2-201ENST00000434626 151 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.66□□□□□ -2.14
EFNB3Q15768 STAG3L5P-204ENST00000443759 179 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 RNU6-794P-201ENST00000517261 64 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.66□□□□□ -2.14
EFNB3Q15768 AC100767.1-201ENST00000528178 123 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.66□□□□□ -2.14
EFNB3Q15768 AC009779.6-201ENST00000603972 165 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.66□□□□□ -2.14
EFNB3Q15768 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
EFNB3Q15768 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
EFNB3Q15768 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
EFNB3Q15768 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
EFNB3Q15768 Y_RNA.199-201ENST00000364014 102 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 Y_RNA.200-201ENST00000364018 102 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 Y_RNA.253-201ENST00000364562 112 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 RNU6-1031P-201ENST00000384773 107 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 MIR1298-201ENST00000408783 112 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 RNU7-34P-201ENST00000459394 64 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 HMGN1P7-201ENST00000491722 313 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 RNA5SP364-201ENST00000516938 78 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 JPX_2.1-201ENST00000614161 69 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 AL365265.1-201ENST00000621045 234 ntBASIC1.65□□□□□ -2.15
EFNB3Q15768 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
EFNB3Q15768 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
EFNB3Q15768 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
EFNB3Q15768 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
EFNB3Q15768 Y_RNA.83-201ENST00000363005 113 ntBASIC1.64□□□□□ -2.15
EFNB3Q15768 MIR626-201ENST00000385032 94 ntBASIC1.64□□□□□ -2.15
EFNB3Q15768 RNA5SP496-201ENST00000391240 109 ntBASIC1.64□□□□□ -2.15
EFNB3Q15768 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.64□□□□□ -2.15
EFNB3Q15768 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.64□□□□□ -2.15
EFNB3Q15768 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.64□□□□□ -2.15
EFNB3Q15768 RNU6-237P-201ENST00000515985 71 ntBASIC1.64□□□□□ -2.15
EFNB3Q15768 Y_RNA.714-201ENST00000517065 90 ntBASIC1.64□□□□□ -2.15
EFNB3Q15768 AC015712.3-201ENST00000559380 164 ntBASIC1.64□□□□□ -2.15
EFNB3Q15768 MIR3935-201ENST00000583472 104 ntBASIC1.64□□□□□ -2.15
EFNB3Q15768 AL591926.4-201ENST00000616895 298 ntBASIC1.64□□□□□ -2.15
EFNB3Q15768 RNU6-653P-201ENST00000363074 106 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 RNU6-414P-201ENST00000363705 104 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 RNU4-41P-201ENST00000364426 143 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 U8.5-201ENST00000364528 136 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 RNU6-969P-201ENST00000383900 105 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
EFNB3Q15768 Y_RNA.626-201ENST00000411288 95 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 RPL30P13-201ENST00000418873 348 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 AL445685.2-201ENST00000422551 342 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 OR9P1P-201ENST00000496431 281 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 AC108210.2-201ENST00000503681 201 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 AC107393.1-201ENST00000512403 346 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 MIR4762-201ENST00000585261 75 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 MIR6845-201ENST00000613182 61 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 uc_338.20-201ENST00000621563 178 ntBASIC1.63□□□□□ -2.15
EFNB3Q15768 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.63□□□□□ -2.15
EFNB3Q15768 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
EFNB3Q15768 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.63□□□□□ -2.15
EFNB3Q15768 AC068700.1-201ENST00000565862 3754 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
EFNB3Q15768 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
EFNB3Q15768 MIR126-201ENST00000362291 85 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 MIR764-201ENST00000390811 85 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 AC023449.1-201ENST00000454464 154 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 RNU6-1007P-201ENST00000516586 107 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 RNU6-548P-201ENST00000517083 115 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 AC087685.1-201ENST00000587507 141 ntBASIC1.62□□□□□ -2.15
EFNB3Q15768 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
EFNB3Q15768 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
EFNB3Q15768 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
EFNB3Q15768 Y_RNA.24-201ENST00000362508 103 ntBASIC1.61□□□□□ -2.15
EFNB3Q15768 SNORD68-201ENST00000363214 84 ntBASIC1.61□□□□□ -2.15
EFNB3Q15768 RNU6-1209P-201ENST00000363655 107 ntBASIC1.61□□□□□ -2.15
EFNB3Q15768 Y_RNA.796-201ENST00000364268 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 567.5 ms