Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RNU6-322P-201ENST00000516010 103 ntBASIC0.77□□□□□ -2.29
SMARCB1Q12824 SNORA70.12-201ENST00000516084 153 ntBASIC0.77□□□□□ -2.29
SMARCB1Q12824 RNU4-77P-201ENST00000516692 156 ntBASIC0.77□□□□□ -2.29
SMARCB1Q12824 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.77□□□□□ -2.29
SMARCB1Q12824 MIR5188-201ENST00000583467 113 ntBASIC0.77□□□□□ -2.29
SMARCB1Q12824 VN1R91P-201ENST00000594377 169 ntBASIC0.77□□□□□ -2.29
SMARCB1Q12824 PRELID3BP2-201ENST00000605362 201 ntBASIC0.77□□□□□ -2.29
SMARCB1Q12824 SNORD58B-201ENST00000607313 66 ntBASIC0.77□□□□□ -2.29
SMARCB1Q12824 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.77□□□□□ -2.29
SMARCB1Q12824 AC008163.1-202ENST00000636004 2889 ntBASIC0.77□□□□□ -2.29
SMARCB1Q12824 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SMARCB1Q12824 Y_RNA.58-201ENST00000362807 102 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 Y_RNA.80-201ENST00000362996 102 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 Y_RNA.154-201ENST00000363624 102 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 RNY3P1-201ENST00000365085 102 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 RNY3-201ENST00000365484 102 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 Y_RNA.485-201ENST00000384395 102 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 AL590004.1-201ENST00000405321 300 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 SNRPGP10-201ENST00000432323 225 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.76□□□□□ -2.29
SMARCB1Q12824 AC090142.3-201ENST00000519012 385 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 AL391903.3-201ENST00000612158 163 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 AC133104.2-201ENST00000615272 193 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 MIR6515-201ENST00000619843 57 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 AC112487.2-201ENST00000637950 304 ntBASIC0.76□□□□□ -2.29
SMARCB1Q12824 Y_RNA.187-201ENST00000363918 113 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 RNY1-201ENST00000364228 113 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 Y_RNA.230-201ENST00000364348 109 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 Y_RNA.315-201ENST00000365117 102 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 MCFD2P1-201ENST00000417812 300 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 MTND1P14-201ENST00000427400 950 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.75□□□□□ -2.29
SMARCB1Q12824 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.75□□□□□ -2.29
SMARCB1Q12824 RN7SKP295-201ENST00000517264 153 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.75□□□□□ -2.29
SMARCB1Q12824 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SMARCB1Q12824 AC092447.9-201ENST00000603395 144 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 AL357312.1-201ENST00000603879 298 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 AC005972.2-201ENST00000604690 348 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 RBM11P1-201ENST00000604951 799 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 MIR7111-201ENST00000619751 72 ntBASIC0.75□□□□□ -2.29
SMARCB1Q12824 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.75□□□□□ -2.29
SMARCB1Q12824 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
SMARCB1Q12824 RNU1-133P-201ENST00000364867 167 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 SNORD50B-201ENST00000364995 70 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 Y_RNA.310-201ENST00000365063 113 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 Y_RNA.384-201ENST00000383909 102 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 Y_RNA.458-201ENST00000384240 102 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 SNORD12-201ENST00000391002 90 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 AL390729.2-201ENST00000416137 156 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 AC245047.8-201ENST00000456455 284 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 LINC01399-202ENST00000458450 244 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 RNU7-21P-201ENST00000459430 62 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 RNU7-41P-201ENST00000515917 61 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 AP003716.2-201ENST00000528260 108 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 MIR3145-201ENST00000580727 82 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 DEFB117-201ENST00000602356 141 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 AC010205.1-201ENST00000616668 449 ntBASIC0.74□□□□□ -2.29
SMARCB1Q12824 AC068700.1-201ENST00000565862 3754 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 Y_RNA.70-201ENST00000362886 110 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 AC117470.1-201ENST00000381974 330 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 Y_RNA.428-201ENST00000384078 102 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 SNORA80D-201ENST00000384488 135 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 RNU6-1105P-201ENST00000384774 107 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 RNU6-855P-201ENST00000410395 104 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 MLLT10P1-201ENST00000418346 262 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.73□□□□□ -2.29
SMARCB1Q12824 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.73□□□□□ -2.29
SMARCB1Q12824 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 SNORD45.4-201ENST00000516629 73 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 SNORD116.3-201ENST00000517176 78 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.73□□□□□ -2.29
SMARCB1Q12824 SNORA25.3-201ENST00000363205 127 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 Y_RNA.252-201ENST00000364556 101 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 Y_RNA.813-201ENST00000364639 102 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 Y_RNA.263-201ENST00000364659 114 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 RNY3P14-201ENST00000384309 102 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 RNU6-937P-201ENST00000384325 106 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 SNORA72-201ENST00000384339 132 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 MIR452-201ENST00000385020 85 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 RNU6-130P-201ENST00000411112 103 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 MTCO2P27-201ENST00000420740 428 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 AC005042.3-201ENST00000453230 174 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 RPL39P39-201ENST00000455840 151 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 PART1_1.1-201ENST00000611761 217 ntBASIC0.72□□□□□ -2.29
SMARCB1Q12824 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
SMARCB1Q12824 Y_RNA.356-201ENST00000365475 113 ntBASIC0.71□□□□□ -2.3
SMARCB1Q12824 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
SMARCB1Q12824 MIR1185-1-201ENST00000408598 86 ntBASIC0.71□□□□□ -2.3
SMARCB1Q12824 RNU4-30P-201ENST00000410245 143 ntBASIC0.71□□□□□ -2.3
SMARCB1Q12824 SNORA74.3-201ENST00000517108 154 ntBASIC0.71□□□□□ -2.3
SMARCB1Q12824 AL606534.2-204ENST00000635008 178 ntBASIC0.71□□□□□ -2.3
SMARCB1Q12824 RNA5SP264-201ENST00000363115 107 ntBASIC0.7□□□□□ -2.3
SMARCB1Q12824 Y_RNA.331-201ENST00000365267 102 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms