Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MIR8055-201ENST00000610739 97 ntBASIC-1.14□□□□□ -2.59
HMGXB3Q12766 MIR6082-201ENST00000613604 109 ntBASIC-1.14□□□□□ -2.59
HMGXB3Q12766 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 RNU4-1-201ENST00000363925 141 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 RNU6-324P-201ENST00000363957 106 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 RNU6-136P-201ENST00000384663 107 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 MTCO2P27-201ENST00000420740 428 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 MTCO3P38-201ENST00000468910 766 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 MTND2P32-201ENST00000521584 1038 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 RMST_3.1-201ENST00000611651 109 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 RNU6-926P-201ENST00000384075 107 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 RNU6-535P-201ENST00000384722 107 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 UQCRBP2-201ENST00000447827 297 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.15□□□□□ -2.59
HMGXB3Q12766 SNORA25.13-201ENST00000516395 103 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 RNU6-612P-201ENST00000516909 102 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.15□□□□□ -2.59
HMGXB3Q12766 AC068880.4-201ENST00000623082 495 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 AC022418.1-201ENST00000624118 445 ntBASIC-1.15□□□□□ -2.59
HMGXB3Q12766 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
HMGXB3Q12766 MIR487A-201ENST00000385009 80 ntBASIC-1.16□□□□□ -2.6
HMGXB3Q12766 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
HMGXB3Q12766 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.16□□□□□ -2.6
HMGXB3Q12766 AL354751.2-201ENST00000415471 210 ntBASIC-1.16□□□□□ -2.6
HMGXB3Q12766 BX276092.1-201ENST00000427368 251 ntBASIC-1.16□□□□□ -2.6
HMGXB3Q12766 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.16□□□□□ -2.6
HMGXB3Q12766 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.16□□□□□ -2.6
HMGXB3Q12766 AC022784.5-201ENST00000522241 437 ntBASIC-1.16□□□□□ -2.6
HMGXB3Q12766 MTND1P35-201ENST00000526739 508 ntBASIC-1.16□□□□□ -2.6
HMGXB3Q12766 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.16□□□□□ -2.6
HMGXB3Q12766 MIR3941-201ENST00000582572 103 ntBASIC-1.16□□□□□ -2.6
HMGXB3Q12766 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.16□□□□□ -2.6
HMGXB3Q12766 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 SNORD114-7-201ENST00000362520 77 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 RNU6-550P-201ENST00000391057 101 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 SNORD110-201ENST00000408189 75 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.17□□□□□ -2.6
HMGXB3Q12766 RNU6-334P-201ENST00000517072 102 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 AC069113.1-201ENST00000517763 267 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 MTATP6P15-201ENST00000527233 835 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 AC022960.3-201ENST00000619794 441 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 AC126544.2-201ENST00000625174 749 ntBASIC-1.17□□□□□ -2.6
HMGXB3Q12766 SNORD114-25-201ENST00000363742 72 ntBASIC-1.18□□□□□ -2.6
HMGXB3Q12766 SNORA24-201ENST00000384096 131 ntBASIC-1.18□□□□□ -2.6
HMGXB3Q12766 RNU6-434P-201ENST00000384376 107 ntBASIC-1.18□□□□□ -2.6
HMGXB3Q12766 RNU6-455P-201ENST00000384681 107 ntBASIC-1.18□□□□□ -2.6
HMGXB3Q12766 AC018710.1-201ENST00000506509 158 ntBASIC-1.18□□□□□ -2.6
HMGXB3Q12766 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.18□□□□□ -2.6
HMGXB3Q12766 RNU7-181P-201ENST00000517234 74 ntBASIC-1.18□□□□□ -2.6
HMGXB3Q12766 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.18□□□□□ -2.6
HMGXB3Q12766 BNIP3P40-201ENST00000596017 556 ntBASIC-1.18□□□□□ -2.6
HMGXB3Q12766 AL596211.1-201ENST00000569873 2277 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 RNU6-490P-201ENST00000362985 107 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 RNU6-433P-201ENST00000363216 104 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 RNU6-393P-201ENST00000384475 107 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 RNU6-291P-201ENST00000384720 107 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 MIR496-201ENST00000385226 102 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 RNU6-131P-201ENST00000391144 107 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.19□□□□□ -2.6
HMGXB3Q12766 RNU6-732P-201ENST00000516033 103 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 AC091144.1-201ENST00000519573 138 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 AC073648.5-201ENST00000603502 305 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 U6.114-201ENST00000636407 96 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 Z97988.1-201ENST00000637697 135 ntBASIC-1.19□□□□□ -2.6
HMGXB3Q12766 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 RNU6-727P-201ENST00000363592 107 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
HMGXB3Q12766 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AP003072.1-201ENST00000531740 145 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 MTCO3P23-201ENST00000561363 289 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 MIR4499-201ENST00000584834 69 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AC002044.1-201ENST00000606707 158 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.2□□□□□ -2.6
HMGXB3Q12766 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.2□□□□□ -2.6
HMGXB3Q12766 MIR9-2-201ENST00000384838 87 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 SNORD41.1-201ENST00000391000 69 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 SNORD115.1-201ENST00000391109 76 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 MIR450B-201ENST00000401182 78 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 ELOCP4-201ENST00000420090 333 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AC236972.2-201ENST00000434979 310 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 SNRPGP14-201ENST00000435400 219 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AL512286.1-201ENST00000439244 400 ntBASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.2□□□□□ -2.6
HMGXB3Q12766 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.2□□□□□ -2.6
HMGXB3Q12766 SNORA25.10-201ENST00000515926 124 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms