Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU7-73P-201ENST00000458743 63 ntBASIC-1.18□□□□□ -2.6
HIST1H1AQ02539 RNU6-475P-201ENST00000516073 104 ntBASIC-1.18□□□□□ -2.6
HIST1H1AQ02539 MIR548AX-201ENST00000580117 73 ntBASIC-1.18□□□□□ -2.6
HIST1H1AQ02539 Z84480.1-201ENST00000605131 311 ntBASIC-1.18□□□□□ -2.6
HIST1H1AQ02539 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 SNORA22B-201ENST00000383876 138 ntBASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 AC236972.2-201ENST00000434979 310 ntBASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 SNRPGP14-201ENST00000435400 219 ntBASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 MTATP6P14-201ENST00000455189 673 ntBASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 AP000811.1-201ENST00000603803 651 ntBASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 AC245008.1-201ENST00000608123 476 ntBASIC-1.19□□□□□ -2.6
HIST1H1AQ02539 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.2□□□□□ -2.6
HIST1H1AQ02539 RNU6-933P-201ENST00000384424 107 ntBASIC-1.2□□□□□ -2.6
HIST1H1AQ02539 MTCO2P8-201ENST00000412213 658 ntBASIC-1.2□□□□□ -2.6
HIST1H1AQ02539 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.2□□□□□ -2.6
HIST1H1AQ02539 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.2□□□□□ -2.6
HIST1H1AQ02539 MTCO1P29-201ENST00000496868 288 ntBASIC-1.2□□□□□ -2.6
HIST1H1AQ02539 AL158063.1-201ENST00000615349 536 ntBASIC-1.2□□□□□ -2.6
HIST1H1AQ02539 AC006927.3-201ENST00000638789 384 ntBASIC-1.2□□□□□ -2.6
HIST1H1AQ02539 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.21□□□□□ -2.6
HIST1H1AQ02539 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.21□□□□□ -2.6
HIST1H1AQ02539 MIR196A1-201ENST00000388006 70 ntBASIC-1.21□□□□□ -2.6
HIST1H1AQ02539 MTATP6P23-201ENST00000440153 476 ntBASIC-1.21□□□□□ -2.6
HIST1H1AQ02539 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.21□□□□□ -2.6
HIST1H1AQ02539 AC018714.1-201ENST00000605028 208 ntBASIC-1.21□□□□□ -2.6
HIST1H1AQ02539 AC084368.1-201ENST00000620935 65 ntBASIC-1.21□□□□□ -2.6
HIST1H1AQ02539 AL162376.1-201ENST00000624117 175 ntBASIC-1.21□□□□□ -2.6
HIST1H1AQ02539 AP002371.2-201ENST00000624450 503 ntBASIC-1.21□□□□□ -2.6
HIST1H1AQ02539 SNORD114-15-201ENST00000364687 72 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 RNU6-903P-201ENST00000391270 109 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 RNA5SP395-201ENST00000516567 118 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 MIR3682-201ENST00000581338 84 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 AC087683.2-201ENST00000611384 326 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 AC087588.2-201ENST00000617667 426 ntBASIC-1.22□□□□□ -2.6
HIST1H1AQ02539 RNU6-268P-201ENST00000364174 107 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 RNU6-442P-201ENST00000383968 104 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 SNORA24-201ENST00000384096 131 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 RNU6-636P-201ENST00000384598 107 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 RNU6-291P-201ENST00000384720 107 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 UQCRBP2-201ENST00000447827 297 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 RPL30P10-201ENST00000488148 337 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 POLR3GP1-201ENST00000594073 261 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 MIR6082-201ENST00000613604 109 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 Z97988.1-201ENST00000637697 135 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 MIR6086-201ENST00000638065 55 ntBASIC-1.23□□□□□ -2.61
HIST1H1AQ02539 MIR410-201ENST00000362222 80 ntBASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 RNU6-726P-201ENST00000364680 107 ntBASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 AP001330.5-201ENST00000607176 411 ntBASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.24□□□□□ -2.61
HIST1H1AQ02539 RNY4P3-201ENST00000365254 95 ntBASIC-1.25□□□□□ -2.61
HIST1H1AQ02539 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.25□□□□□ -2.61
HIST1H1AQ02539 MTCO3P38-201ENST00000468910 766 ntBASIC-1.25□□□□□ -2.61
HIST1H1AQ02539 RNA5SP66-201ENST00000517178 101 ntBASIC-1.25□□□□□ -2.61
HIST1H1AQ02539 RNA5SP169-201ENST00000517268 117 ntBASIC-1.25□□□□□ -2.61
HIST1H1AQ02539 AC134698.4-201ENST00000523451 826 ntBASIC-1.25□□□□□ -2.61
HIST1H1AQ02539 AC005972.2-201ENST00000604690 348 ntBASIC-1.25□□□□□ -2.61
HIST1H1AQ02539 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 RNU6-454P-201ENST00000364292 107 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 RNY4P34-201ENST00000364779 95 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 U8.6-201ENST00000364939 135 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 SNORA1-201ENST00000384107 130 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 RNU6-281P-201ENST00000384212 103 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 RNU6-535P-201ENST00000384722 107 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 RNU6-765P-201ENST00000516916 99 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 MTND1P24-201ENST00000552175 861 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 AC063944.3-201ENST00000609969 533 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 MIR8055-201ENST00000610739 97 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 HULC.1-201ENST00000612720 240 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 AC105081.1-201ENST00000617727 106 ntBASIC-1.26□□□□□ -2.61
HIST1H1AQ02539 RNU6-403P-201ENST00000363163 104 ntBASIC-1.27□□□□□ -2.61
HIST1H1AQ02539 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.27□□□□□ -2.61
HIST1H1AQ02539 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.27□□□□□ -2.61
HIST1H1AQ02539 RNU6-195P-201ENST00000411352 109 ntBASIC-1.27□□□□□ -2.61
HIST1H1AQ02539 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.27□□□□□ -2.61
HIST1H1AQ02539 RPL7P42-201ENST00000481005 679 ntBASIC-1.27□□□□□ -2.61
HIST1H1AQ02539 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.27□□□□□ -2.61
HIST1H1AQ02539 AC090616.2-202ENST00000584248 222 ntBASIC-1.27□□□□□ -2.61
HIST1H1AQ02539 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms