Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC009310.1-201ENST00000414414 451 ntBASIC1.9□□□□□ -2.11
RAE1P78406 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
RAE1P78406 AC245047.8-201ENST00000456455 284 ntBASIC1.9□□□□□ -2.11
RAE1P78406 SCARNA8-201ENST00000515924 131 ntBASIC1.9□□□□□ -2.11
RAE1P78406 AC022559.1-201ENST00000520905 205 ntBASIC1.9□□□□□ -2.11
RAE1P78406 MIR4744-201ENST00000581563 82 ntBASIC1.9□□□□□ -2.11
RAE1P78406 SNORA28-201ENST00000606769 126 ntBASIC1.9□□□□□ -2.11
RAE1P78406 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
RAE1P78406 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
RAE1P78406 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.9□□□□□ -2.11
RAE1P78406 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAE1P78406 RNU6-682P-201ENST00000363843 106 ntBASIC1.89□□□□□ -2.11
RAE1P78406 U8.5-201ENST00000364528 136 ntBASIC1.89□□□□□ -2.11
RAE1P78406 Y_RNA.265-201ENST00000364677 108 ntBASIC1.89□□□□□ -2.11
RAE1P78406 SNORA4.2-201ENST00000365313 147 ntBASIC1.89□□□□□ -2.11
RAE1P78406 Y_RNA.555-201ENST00000384673 110 ntBASIC1.89□□□□□ -2.11
RAE1P78406 RNU6-1228P-201ENST00000391014 107 ntBASIC1.89□□□□□ -2.11
RAE1P78406 RN7SKP200-201ENST00000410564 320 ntBASIC1.89□□□□□ -2.11
RAE1P78406 STAG3L5P-204ENST00000443759 179 ntBASIC1.89□□□□□ -2.11
RAE1P78406 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.89□□□□□ -2.11
RAE1P78406 RNU6-1007P-201ENST00000516586 107 ntBASIC1.89□□□□□ -2.11
RAE1P78406 RNU6-453P-201ENST00000516819 85 ntBASIC1.89□□□□□ -2.11
RAE1P78406 MIR4762-201ENST00000585261 75 ntBASIC1.89□□□□□ -2.11
RAE1P78406 AC087685.1-201ENST00000587507 141 ntBASIC1.89□□□□□ -2.11
RAE1P78406 AC064859.1-201ENST00000624741 174 ntBASIC1.89□□□□□ -2.11
RAE1P78406 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.89□□□□□ -2.11
RAE1P78406 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAE1P78406 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.88□□□□□ -2.11
RAE1P78406 MIR126-201ENST00000362291 85 ntBASIC1.88□□□□□ -2.11
RAE1P78406 RNA5SP276-201ENST00000362580 94 ntBASIC1.88□□□□□ -2.11
RAE1P78406 Y_RNA.182-201ENST00000363880 111 ntBASIC1.88□□□□□ -2.11
RAE1P78406 RNU6-301P-201ENST00000384277 107 ntBASIC1.88□□□□□ -2.11
RAE1P78406 SNORA12.1-201ENST00000390873 148 ntBASIC1.88□□□□□ -2.11
RAE1P78406 RNA5SP425-201ENST00000410336 112 ntBASIC1.88□□□□□ -2.11
RAE1P78406 SNRPGP10-201ENST00000432323 225 ntBASIC1.88□□□□□ -2.11
RAE1P78406 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RAE1P78406 AC023449.1-201ENST00000454464 154 ntBASIC1.88□□□□□ -2.11
RAE1P78406 snoU13.27-201ENST00000459278 104 ntBASIC1.88□□□□□ -2.11
RAE1P78406 RPS27P21-201ENST00000486977 252 ntBASIC1.88□□□□□ -2.11
RAE1P78406 SNORA31.17-201ENST00000516953 127 ntBASIC1.88□□□□□ -2.11
RAE1P78406 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.88□□□□□ -2.11
RAE1P78406 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
RAE1P78406 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.88□□□□□ -2.11
RAE1P78406 U6.106-201ENST00000636360 105 ntBASIC1.88□□□□□ -2.11
RAE1P78406 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RAE1P78406 AC131280.1-202ENST00000624067 4211 ntBASIC1.87□□□□□ -2.11
RAE1P78406 Y_RNA.75-201ENST00000362927 97 ntBASIC1.87□□□□□ -2.11
RAE1P78406 Y_RNA.240-201ENST00000364469 95 ntBASIC1.87□□□□□ -2.11
RAE1P78406 Y_RNA.270-201ENST00000364693 104 ntBASIC1.87□□□□□ -2.11
RAE1P78406 RNU6-275P-201ENST00000364910 107 ntBASIC1.87□□□□□ -2.11
RAE1P78406 Y_RNA.412-201ENST00000384001 104 ntBASIC1.87□□□□□ -2.11
RAE1P78406 MIR522-201ENST00000385071 87 ntBASIC1.87□□□□□ -2.11
RAE1P78406 RNU6-578P-201ENST00000390980 103 ntBASIC1.87□□□□□ -2.11
RAE1P78406 RNA5SP212-201ENST00000391223 107 ntBASIC1.87□□□□□ -2.11
RAE1P78406 AL606845.1-201ENST00000404881 255 ntBASIC1.87□□□□□ -2.11
RAE1P78406 AL034345.1-201ENST00000407768 123 ntBASIC1.87□□□□□ -2.11
RAE1P78406 SNORA11.2-201ENST00000408318 127 ntBASIC1.87□□□□□ -2.11
RAE1P78406 MIR548I3-201ENST00000408378 149 ntBASIC1.87□□□□□ -2.11
RAE1P78406 MIR548I1-201ENST00000408810 149 ntBASIC1.87□□□□□ -2.11
RAE1P78406 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.87□□□□□ -2.11
RAE1P78406 AL356379.1-201ENST00000414105 126 ntBASIC1.87□□□□□ -2.11
RAE1P78406 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.87□□□□□ -2.11
RAE1P78406 AC079804.2-201ENST00000490376 200 ntBASIC1.87□□□□□ -2.11
RAE1P78406 OR9P1P-201ENST00000496431 281 ntBASIC1.87□□□□□ -2.11
RAE1P78406 Y_RNA.797-201ENST00000515977 94 ntBASIC1.87□□□□□ -2.11
RAE1P78406 RNU6-1219P-201ENST00000516143 112 ntBASIC1.87□□□□□ -2.11
RAE1P78406 RNU6-861P-201ENST00000516745 106 ntBASIC1.87□□□□□ -2.11
RAE1P78406 Y_RNA.714-201ENST00000517065 90 ntBASIC1.87□□□□□ -2.11
RAE1P78406 MRPS18CP4-201ENST00000535821 231 ntBASIC1.87□□□□□ -2.11
RAE1P78406 AC091544.4-201ENST00000555268 342 ntBASIC1.87□□□□□ -2.11
RAE1P78406 MIR4709-201ENST00000577272 72 ntBASIC1.87□□□□□ -2.11
RAE1P78406 MIR4435-1-201ENST00000582552 80 ntBASIC1.87□□□□□ -2.11
RAE1P78406 AC108706.1-201ENST00000611053 297 ntBASIC1.87□□□□□ -2.11
RAE1P78406 uc_338.4-201ENST00000616635 176 ntBASIC1.87□□□□□ -2.11
RAE1P78406 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.87□□□□□ -2.11
RAE1P78406 RNU6-1031P-201ENST00000384773 107 ntBASIC1.86□□□□□ -2.11
RAE1P78406 MT-TT-201ENST00000387460 66 ntBASIC1.86□□□□□ -2.11
RAE1P78406 RNU6-131P-201ENST00000391144 107 ntBASIC1.86□□□□□ -2.11
RAE1P78406 PCNPP3-201ENST00000393579 471 ntBASIC1.86□□□□□ -2.11
RAE1P78406 FTH1P12-201ENST00000432137 551 ntBASIC1.86□□□□□ -2.11
RAE1P78406 RNU7-34P-201ENST00000459394 64 ntBASIC1.86□□□□□ -2.11
RAE1P78406 NDUFA4P2-201ENST00000489989 244 ntBASIC1.86□□□□□ -2.11
RAE1P78406 SNORD77.4-201ENST00000516158 81 ntBASIC1.86□□□□□ -2.11
RAE1P78406 AC109810.1-201ENST00000534066 224 ntBASIC1.86□□□□□ -2.11
RAE1P78406 AC022254.1-201ENST00000567857 235 ntBASIC1.86□□□□□ -2.11
RAE1P78406 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.86□□□□□ -2.11
RAE1P78406 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
RAE1P78406 AL049861.1-201ENST00000603130 150 ntBASIC1.86□□□□□ -2.11
RAE1P78406 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
RAE1P78406 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RAE1P78406 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RAE1P78406 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RAE1P78406 Y_RNA.23-201ENST00000362496 106 ntBASIC1.85□□□□□ -2.11
RAE1P78406 SNORD68-201ENST00000363214 84 ntBASIC1.85□□□□□ -2.11
RAE1P78406 RNU6-209P-201ENST00000384118 107 ntBASIC1.85□□□□□ -2.11
RAE1P78406 RNU6-886P-201ENST00000384319 105 ntBASIC1.85□□□□□ -2.11
RAE1P78406 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RAE1P78406 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
RAE1P78406 RNA5SP233-201ENST00000459153 113 ntBASIC1.85□□□□□ -2.11
RAE1P78406 RNA5SP57-201ENST00000459463 123 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms