Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 RNU6-517P-201ENST00000384362 110 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 SNORD38B-201ENST00000384690 67 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 SNORD28-201ENST00000384706 75 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
RPS28P62857 RNU2-9P-201ENST00000410194 145 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 RNU4-83P-201ENST00000410863 133 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 MTATP6P14-201ENST00000455189 673 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 RNU6-189P-201ENST00000516120 101 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 SNORA31.14-201ENST00000516728 116 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 AC134698.4-201ENST00000523451 826 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 MIR4636-201ENST00000582271 80 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 AC006441.5-201ENST00000612680 209 ntBASIC-1.06□□□□□ -2.58
RPS28P62857 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.06□□□□□ -2.58
RPS28P62857 MT-TF-201ENST00000387314 71 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 MTCO2P27-201ENST00000420740 428 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.07□□□□□ -2.58
RPS28P62857 MTND1P14-201ENST00000427400 950 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 AL500527.2-201ENST00000454105 95 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 snoU13.16-201ENST00000459350 104 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 RPL30P10-201ENST00000488148 337 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 AC005828.6-201ENST00000606610 232 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 HULC.1-201ENST00000612720 240 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 AL158063.1-201ENST00000615349 536 ntBASIC-1.07□□□□□ -2.58
RPS28P62857 RNU6-324P-201ENST00000363957 106 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 Y_RNA.796-201ENST00000364268 102 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 RNU4-36P-201ENST00000364294 144 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 U8.6-201ENST00000364939 135 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 Y_RNA.799-201ENST00000364992 102 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 RNU6-442P-201ENST00000383968 104 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 RNU6-214P-201ENST00000384130 107 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 Z95118.1-201ENST00000421372 247 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.08□□□□□ -2.58
RPS28P62857 MTATP6P23-201ENST00000440153 476 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 U8.19-201ENST00000459095 133 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 U8.22-201ENST00000459141 133 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 SNORA27.4-201ENST00000516650 95 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 MIR8066-201ENST00000617280 78 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 AC093726.3-201ENST00000637588 150 ntBASIC-1.08□□□□□ -2.58
RPS28P62857 SNORD114-7-201ENST00000362520 77 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 AC236972.2-201ENST00000434979 310 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 AL138752.1-201ENST00000452964 351 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 RNU7-180P-201ENST00000459240 63 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 CCDC34P1-201ENST00000507441 517 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 SNORA25.10-201ENST00000515926 124 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 AC008536.2-201ENST00000607284 349 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 AC244669.1-204ENST00000621564 178 ntBASIC-1.09□□□□□ -2.58
RPS28P62857 SNORD114-25-201ENST00000363742 72 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 Y_RNA.355-201ENST00000365462 98 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 RNU6-790P-201ENST00000384479 105 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 SNORA75.4-201ENST00000391278 119 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 SNORD93-201ENST00000408813 74 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 MTCO2P16-201ENST00000436962 677 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.1□□□□□ -2.59
RPS28P62857 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.1□□□□□ -2.59
RPS28P62857 MIR5706-201ENST00000579841 80 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 AC005972.2-201ENST00000604690 348 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 AL157392.4-201ENST00000609756 345 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 AL133215.3-201ENST00000609801 448 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 AP000240.1-201ENST00000609910 452 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 MIR7844-201ENST00000616161 122 ntBASIC-1.1□□□□□ -2.59
RPS28P62857 SNORD95.1-201ENST00000364099 68 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 RNU6-47P-201ENST00000383866 107 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 SNORA1-201ENST00000384107 130 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 Y_RNA.508-201ENST00000384502 114 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.11□□□□□ -2.59
RPS28P62857 AC093023.1-201ENST00000547375 507 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 MIR4499-201ENST00000584834 69 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 AC245014.2-201ENST00000603689 287 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 AP002371.2-201ENST00000624450 503 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 AC009161.2-201ENST00000624626 138 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 AC007671.2-201ENST00000637344 619 ntBASIC-1.11□□□□□ -2.59
RPS28P62857 RNU6-500P-201ENST00000362349 107 ntBASIC-1.12□□□□□ -2.59
RPS28P62857 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.12□□□□□ -2.59
RPS28P62857 AC009961.2-201ENST00000435771 251 ntBASIC-1.12□□□□□ -2.59
RPS28P62857 RPL39P25-201ENST00000449384 154 ntBASIC-1.12□□□□□ -2.59
RPS28P62857 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.12□□□□□ -2.59
RPS28P62857 AC105029.1-201ENST00000520250 669 ntBASIC-1.12□□□□□ -2.59
RPS28P62857 AP001330.5-201ENST00000607176 411 ntBASIC-1.12□□□□□ -2.59
RPS28P62857 uc_338.19-201ENST00000616808 99 ntBASIC-1.12□□□□□ -2.59
RPS28P62857 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.12□□□□□ -2.59
RPS28P62857 ZNF299P-201ENST00000406845 1804 ntBASIC-1.12□□□□□ -2.59
RPS28P62857 Y_RNA.238-201ENST00000364441 102 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 RNY3P9-201ENST00000384727 106 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 MIR635-201ENST00000384830 98 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 AL606923.1-201ENST00000406616 190 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.13□□□□□ -2.59
RPS28P62857 snoU13.2-201ENST00000459201 104 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 AC021146.6-201ENST00000514659 117 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 RNU2-13P-201ENST00000515909 113 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 AC092747.3-201ENST00000603769 301 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 TUSC7.1-201ENST00000610969 165 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 AC010205.1-201ENST00000616668 449 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 AC105081.1-201ENST00000617727 106 ntBASIC-1.13□□□□□ -2.59
RPS28P62857 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms