| WNT3 | P56703 | Y_RNA.796-201 | ENST00000364268 | 102 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | Y_RNA.233-201 | ENST00000364407 | 101 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | Y_RNA.799-201 | ENST00000364992 | 102 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | SNORA67.3-201 | ENST00000384366 | 140 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | RNU6-950P-201 | ENST00000384651 | 107 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | SNORA12.1-201 | ENST00000390873 | 148 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | RNU6ATAC15P-201 | ENST00000408279 | 121 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | RN7SKP200-201 | ENST00000410564 | 320 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | CFLAR-AS1-202 | ENST00000474886 | 223 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | Y_RNA.797-201 | ENST00000515977 | 94 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | SNORA31.10-201 | ENST00000516482 | 106 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | SCARNA16.3-201 | ENST00000516595 | 184 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | MIR5688-201 | ENST00000580619 | 83 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| WNT3 | P56703 | FGF7-206 | ENST00000614567 | 3936 nt | APPRIS P1 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | Y_RNA.270-201 | ENST00000364693 | 104 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | SNORA64-201 | ENST00000384674 | 134 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNA5SP496-201 | ENST00000391240 | 109 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR1289-2-201 | ENST00000408360 | 111 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU2-64P-201 | ENST00000411315 | 191 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RPL23AP6-201 | ENST00000446637 | 472 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL035415.1-201 | ENST00000447150 | 289 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | SCARNA8-201 | ENST00000515924 | 131 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-861P-201 | ENST00000516745 | 106 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR1273D-201 | ENST00000577266 | 86 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR4709-201 | ENST00000577272 | 72 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AC072026.1-201 | ENST00000605023 | 201 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | SNORA28-201 | ENST00000606769 | 126 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AC034238.1-213 | ENST00000611148 | 150 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | ZDBF2-202 | ENST00000611847 | 9890 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| WNT3 | P56703 | PRKD3-201 | ENST00000234179 | 5900 nt | APPRIS P1 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | USP53-202 | ENST00000450251 | 6072 nt | APPRIS P1 TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL596028.1-201 | ENST00000326971 | 197 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | Y_RNA.150-201 | ENST00000363562 | 102 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-103P-201 | ENST00000363686 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNA5SP160-201 | ENST00000364866 | 120 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR616-201 | ENST00000385293 | 97 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-131P-201 | ENST00000391144 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNA5SP482-201 | ENST00000391269 | 118 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL023284.1-201 | ENST00000403956 | 276 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL606845.1-201 | ENST00000404881 | 255 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL356320.1-201 | ENST00000429616 | 163 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-717P-201 | ENST00000459076 | 104 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | snoU13.27-201 | ENST00000459278 | 104 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU7-120P-201 | ENST00000459334 | 63 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | CPHL1P-203 | ENST00000471823 | 523 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNA5SP481-201 | ENST00000516814 | 122 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AP003097.2-201 | ENST00000530126 | 178 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | ST7-OT4_1.1-201 | ENST00000615322 | 200 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| WNT3 | P56703 | SLCO1B3-202 | ENST00000381545 | 2805 nt | APPRIS P1 TSL 2 BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIER3-202 | ENST00000381199 | 5188 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNA5SP212-201 | ENST00000391223 | 107 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL034345.1-201 | ENST00000407768 | 123 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNA5SP338-201 | ENST00000410495 | 85 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | Y_RNA.622-201 | ENST00000411091 | 108 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RN7SKP192-201 | ENST00000411291 | 327 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL021397.1-201 | ENST00000451806 | 248 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | snoU13.15-201 | ENST00000459407 | 104 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AC090255.1-201 | ENST00000495779 | 349 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-1219P-201 | ENST00000516143 | 112 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU7-28P-201 | ENST00000516759 | 62 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | Y_RNA.714-201 | ENST00000517065 | 90 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AC138625.2-201 | ENST00000563968 | 551 nt | TSL 3 BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR4744-201 | ENST00000581563 | 82 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL391903.3-201 | ENST00000612158 | 163 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR7843-201 | ENST00000622274 | 79 nt | BASIC | 2 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-1084P-201 | ENST00000362498 | 107 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNA5SP37-201 | ENST00000365420 | 130 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR802-201 | ENST00000390235 | 94 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RN7SKP51-201 | ENST00000410781 | 304 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | SNORD11-201 | ENST00000459124 | 84 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AC025033.1-201 | ENST00000463883 | 194 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AC098479.1-201 | ENST00000609225 | 154 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR6840-201 | ENST00000611937 | 71 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL773524.1-201 | ENST00000614065 | 229 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR6132-201 | ENST00000622083 | 109 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | THOC2-216 | ENST00000491737 | 4452 nt | TSL 5 BASIC | 1.99 | □□□□□ -2.09 | | |
| WNT3 | P56703 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNA5SP432-201 | ENST00000362480 | 116 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | Y_RNA.121-201 | ENST00000363309 | 113 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | Y_RNA.412-201 | ENST00000384001 | 104 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-578P-201 | ENST00000390980 | 103 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AC244636.1-201 | ENST00000421152 | 228 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AL121914.1-201 | ENST00000450188 | 156 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | OR9P1P-201 | ENST00000496431 | 281 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | Y_RNA.662-201 | ENST00000516028 | 97 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | IGKV3-31-201 | ENST00000523109 | 329 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR4299-201 | ENST00000577899 | 72 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | uc_338.4-201 | ENST00000616635 | 176 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | AC068631.1-220 | ENST00000630726 | 256 nt | TSL 5 BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | U6.106-201 | ENST00000636360 | 105 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-682P-201 | ENST00000363843 | 106 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| WNT3 | P56703 | Y_RNA.435-201 | ENST00000384095 | 112 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-1031P-201 | ENST00000384773 | 107 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| WNT3 | P56703 | MIR522-201 | ENST00000385071 | 87 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RNU6-1228P-201 | ENST00000391014 | 107 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| WNT3 | P56703 | RPS27P21-201 | ENST00000486977 | 252 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| WNT3 | P56703 | NDUFA4P2-201 | ENST00000489989 | 244 nt | BASIC | 1.97 | □□□□□ -2.09 | | |