Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNA5SP127-201ENST00000411051 133 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 RNA5SP184-201ENST00000411071 108 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 SNRPGP13-201ENST00000442212 177 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 HMGN2P32-201ENST00000444648 269 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 RPL39P40-201ENST00000445481 146 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 AC108938.1-201ENST00000451204 136 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 SNORD109B-201ENST00000458961 67 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 SNORD109A-201ENST00000459128 67 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 Y_RNA.666-201ENST00000516187 112 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 SNORD45.4-201ENST00000516629 73 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 RNU6-1270P-201ENST00000517128 108 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 AC007751.1-201ENST00000529260 376 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 AC131055.1-201ENST00000584626 316 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 AL365205.2-201ENST00000594586 68 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.46□□□□□ -2.02
GFRA1P56159 MIR6733-201ENST00000635723 61 ntBASIC2.46□□□□□ -2.02
GFRA1P56159 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
GFRA1P56159 RNU6-888P-201ENST00000363010 101 ntBASIC2.45□□□□□ -2.02
GFRA1P56159 RNU6-915P-201ENST00000364943 103 ntBASIC2.45□□□□□ -2.02
GFRA1P56159 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.45□□□□□ -2.02
GFRA1P56159 AC096725.1-201ENST00000514266 313 ntBASIC2.45□□□□□ -2.02
GFRA1P56159 RNU6-693P-201ENST00000516134 107 ntBASIC2.45□□□□□ -2.02
GFRA1P56159 SNORA9.3-201ENST00000516383 129 ntBASIC2.45□□□□□ -2.02
GFRA1P56159 RNU1-104P-201ENST00000517280 175 ntBASIC2.45□□□□□ -2.02
GFRA1P56159 MIR3162-201ENST00000581818 82 ntBASIC2.45□□□□□ -2.02
GFRA1P56159 MIR4672-201ENST00000583126 81 ntBASIC2.45□□□□□ -2.02
GFRA1P56159 AC011603.4-201ENST00000611325 277 ntBASIC2.45□□□□□ -2.02
GFRA1P56159 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.45□□□□□ -2.02
GFRA1P56159 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
GFRA1P56159 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
GFRA1P56159 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
GFRA1P56159 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
GFRA1P56159 RNU6-859P-201ENST00000362728 107 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 Y_RNA.336-201ENST00000365307 109 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 SNORD61-201ENST00000384252 73 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 MIR624-201ENST00000385217 97 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.44□□□□□ -2.02
GFRA1P56159 AL158823.1-201ENST00000418441 478 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 CYCTP-201ENST00000504253 315 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.44□□□□□ -2.02
GFRA1P56159 RNA5SP76-201ENST00000516277 87 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 SNORA31.10-201ENST00000516482 106 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 RNU6-971P-201ENST00000516920 106 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 SNORA31.25-201ENST00000517242 134 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 SUB1P4-201ENST00000566062 339 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 RPL12P50-201ENST00000603116 116 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 U7.2-201ENST00000607576 63 ntBASIC2.44□□□□□ -2.02
GFRA1P56159 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.43□□□□□ -2.02
GFRA1P56159 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
GFRA1P56159 RNY1P11-201ENST00000363759 113 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 SNORD18B-201ENST00000365659 72 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 RNU6-22P-201ENST00000384355 107 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 RNU6-163P-201ENST00000384396 106 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 SNORA80E-201ENST00000384744 137 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 RNU2-52P-201ENST00000410680 190 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 HSPE1P9-201ENST00000440046 311 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 RNU6-1211P-201ENST00000459179 105 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 RNU7-193P-201ENST00000516723 65 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 MIR3129-201ENST00000581095 76 ntBASIC2.43□□□□□ -2.02
GFRA1P56159 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
GFRA1P56159 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
GFRA1P56159 MIR548O-201ENST00000408583 114 ntBASIC2.42□□□□□ -2.02
GFRA1P56159 RNU2-51P-201ENST00000410708 197 ntBASIC2.42□□□□□ -2.02
GFRA1P56159 AC008267.6-201ENST00000441664 139 ntBASIC2.42□□□□□ -2.02
GFRA1P56159 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.42□□□□□ -2.02
GFRA1P56159 RNU6-479P-201ENST00000516348 105 ntBASIC2.42□□□□□ -2.02
GFRA1P56159 RNA5SP481-201ENST00000516814 122 ntBASIC2.42□□□□□ -2.02
GFRA1P56159 AC006441.5-201ENST00000612680 209 ntBASIC2.42□□□□□ -2.02
GFRA1P56159 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
GFRA1P56159 Y_RNA.120-201ENST00000363304 110 ntBASIC2.41□□□□□ -2.02
GFRA1P56159 RNU6-112P-201ENST00000363599 104 ntBASIC2.41□□□□□ -2.02
GFRA1P56159 RNA5SP450-201ENST00000411206 102 ntBASIC2.41□□□□□ -2.02
GFRA1P56159 UBE2DNL-203ENST00000474922 222 ntBASIC2.41□□□□□ -2.02
GFRA1P56159 RPL23AP63-201ENST00000498752 471 ntBASIC2.41□□□□□ -2.02
GFRA1P56159 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.41□□□□□ -2.02
GFRA1P56159 RNU6-313P-201ENST00000516317 112 ntBASIC2.41□□□□□ -2.02
GFRA1P56159 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.41□□□□□ -2.02
GFRA1P56159 AC004486.1-201ENST00000546846 233 ntBASIC2.41□□□□□ -2.02
GFRA1P56159 AC078899.2-201ENST00000595282 212 ntBASIC2.41□□□□□ -2.02
GFRA1P56159 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.41□□□□□ -2.02
GFRA1P56159 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
GFRA1P56159 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
GFRA1P56159 SNORA4.2-201ENST00000365313 147 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 RNU6-1292P-201ENST00000383856 107 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 SNORA1-201ENST00000384107 130 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 Y_RNA.500-201ENST00000384466 111 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 MIR181B1-201ENST00000385240 110 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 MIR524-201ENST00000385242 87 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 RNU7-34P-201ENST00000459394 64 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 AC114811.1-201ENST00000507207 168 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 RNA5SP437-201ENST00000517249 129 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 Y_RNA.757-201ENST00000578934 114 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 AC027279.3-201ENST00000625055 122 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.4□□□□□ -2.03
GFRA1P56159 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.03
GFRA1P56159 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
GFRA1P56159 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
GFRA1P56159 U8.1-201ENST00000362843 134 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms