Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC005336.3-201ENST00000623833 2679 ntBASIC1.93□□□□□ -2.1
SUMO3P55854 MIR424-201ENST00000362227 98 ntBASIC1.93□□□□□ -2.1
SUMO3P55854 RNU6-1123P-201ENST00000362347 106 ntBASIC1.93□□□□□ -2.1
SUMO3P55854 RNU4-17P-201ENST00000365598 141 ntBASIC1.93□□□□□ -2.1
SUMO3P55854 RNU6-203P-201ENST00000384038 104 ntBASIC1.93□□□□□ -2.1
SUMO3P55854 RNU6-439P-201ENST00000384188 106 ntBASIC1.93□□□□□ -2.1
SUMO3P55854 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SUMO3P55854 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
SUMO3P55854 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.93□□□□□ -2.1
SUMO3P55854 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SUMO3P55854 RNU6-794P-201ENST00000517261 64 ntBASIC1.93□□□□□ -2.1
SUMO3P55854 AC027279.3-201ENST00000625055 122 ntBASIC1.93□□□□□ -2.1
SUMO3P55854 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SUMO3P55854 ZNF720P1-201ENST00000562403 1939 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SUMO3P55854 RNU6-200P-201ENST00000364743 107 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 Y_RNA.308-201ENST00000365043 101 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 Y_RNA.572-201ENST00000384757 98 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 U8.16-201ENST00000391279 133 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 MIR1267-201ENST00000408723 78 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 RN7SKP223-201ENST00000410582 62 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 AC004965.1-201ENST00000413033 213 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 AL161935.2-201ENST00000414627 60 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 Z98742.3-201ENST00000418637 326 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 CALM2P4-201ENST00000430810 426 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.92□□□□□ -2.1
SUMO3P55854 SNORA77B-201ENST00000578179 125 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 Z83818.1-201ENST00000603584 150 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 ZNF355P-201ENST00000427301 3216 ntBASIC1.92□□□□□ -2.1
SUMO3P55854 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SUMO3P55854 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SUMO3P55854 MIR411-201ENST00000362239 96 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 RNU6-1084P-201ENST00000362498 107 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 Y_RNA.229-201ENST00000364347 113 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 Y_RNA.242-201ENST00000364473 110 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 MIR30A-201ENST00000385092 71 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 MIR616-201ENST00000385293 97 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 RNU6-381P-201ENST00000391259 108 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 NDUFA4P2-201ENST00000489989 244 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 CYCTP-201ENST00000504253 315 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 RN7SKP164-201ENST00000516138 266 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 RNY3P16-201ENST00000516338 101 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.91□□□□□ -2.1
SUMO3P55854 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SUMO3P55854 AC120024.3-201ENST00000603167 156 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 uc_338.4-201ENST00000616635 176 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
SUMO3P55854 RNU6-833P-201ENST00000363486 107 ntBASIC1.9□□□□□ -2.11
SUMO3P55854 snoU2_19.4-201ENST00000364329 80 ntBASIC1.9□□□□□ -2.11
SUMO3P55854 RNU6-1318P-201ENST00000365389 103 ntBASIC1.9□□□□□ -2.11
SUMO3P55854 RNY3P5-201ENST00000384127 102 ntBASIC1.9□□□□□ -2.11
SUMO3P55854 MIR660-201ENST00000385235 97 ntBASIC1.9□□□□□ -2.11
SUMO3P55854 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.9□□□□□ -2.11
SUMO3P55854 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
SUMO3P55854 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.9□□□□□ -2.11
SUMO3P55854 RNU7-12P-201ENST00000516030 62 ntBASIC1.9□□□□□ -2.11
SUMO3P55854 AL391903.3-201ENST00000612158 163 ntBASIC1.9□□□□□ -2.11
SUMO3P55854 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.9□□□□□ -2.11
SUMO3P55854 AC095038.3-201ENST00000634439 195 ntBASIC1.9□□□□□ -2.11
SUMO3P55854 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SUMO3P55854 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.89□□□□□ -2.11
SUMO3P55854 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SUMO3P55854 RNU6-103P-201ENST00000363686 107 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 snoU2-30.1-201ENST00000365012 70 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 RNU6-163P-201ENST00000384396 106 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 AL138752.1-201ENST00000452964 351 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 SNORD45.4-201ENST00000516629 73 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 Y_RNA.700-201ENST00000516806 100 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 MIR5002-201ENST00000584713 97 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 AL049861.1-201ENST00000603130 150 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 SNORD3E-202ENST00000627253 216 ntBASIC1.89□□□□□ -2.11
SUMO3P55854 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SUMO3P55854 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SUMO3P55854 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SUMO3P55854 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SUMO3P55854 Y_RNA.7-201ENST00000362352 102 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 Y_RNA.274-201ENST00000364714 101 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 Y_RNA.297-201ENST00000364950 91 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 SNORD50B-201ENST00000364995 70 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 RNU6-1228P-201ENST00000391014 107 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 RNU6-493P-201ENST00000391321 108 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 AC108059.2-201ENST00000434626 151 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 HMGN2P23-201ENST00000456759 269 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 RNU6-138P-201ENST00000515952 107 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 RNU6-1116P-201ENST00000517269 99 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 AC008507.4-201ENST00000585464 127 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 AC090425.1-201ENST00000610007 140 ntBASIC1.88□□□□□ -2.11
SUMO3P55854 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SUMO3P55854 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.88□□□□□ -2.11
SUMO3P55854 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SUMO3P55854 Y_RNA.121-201ENST00000363309 113 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 RNU6-923P-201ENST00000364753 107 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 Y_RNA.336-201ENST00000365307 109 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 SNORA67.3-201ENST00000384366 140 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 Y_RNA.587-201ENST00000391210 103 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 MIR891A-201ENST00000401237 79 ntBASIC1.87□□□□□ -2.11
SUMO3P55854 RNU2-55P-201ENST00000411146 174 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 1230.9 ms