Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SNORD41-201ENST00000386967 70 ntBASIC1.28□□□□□ -2.2
CDH13P55290 RNU6-131P-201ENST00000391144 107 ntBASIC1.28□□□□□ -2.2
CDH13P55290 RNU6-121P-201ENST00000410525 99 ntBASIC1.28□□□□□ -2.2
CDH13P55290 ELOCP20-201ENST00000422460 345 ntBASIC1.28□□□□□ -2.2
CDH13P55290 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH13P55290 LINC01399-202ENST00000458450 244 ntBASIC1.28□□□□□ -2.2
CDH13P55290 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
CDH13P55290 AC117454.1-201ENST00000491120 168 ntBASIC1.28□□□□□ -2.2
CDH13P55290 RPL23AP54-201ENST00000495129 419 ntBASIC1.28□□□□□ -2.2
CDH13P55290 RNU6-237P-201ENST00000515985 71 ntBASIC1.28□□□□□ -2.2
CDH13P55290 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
CDH13P55290 AC087685.1-201ENST00000587507 141 ntBASIC1.28□□□□□ -2.2
CDH13P55290 AC007742.2-201ENST00000618226 398 ntBASIC1.28□□□□□ -2.2
CDH13P55290 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CDH13P55290 RNU6-674P-201ENST00000363831 107 ntBASIC1.27□□□□□ -2.21
CDH13P55290 RNU6-801P-201ENST00000364087 105 ntBASIC1.27□□□□□ -2.21
CDH13P55290 RNU6-639P-201ENST00000384074 107 ntBASIC1.27□□□□□ -2.21
CDH13P55290 RNU6-985P-201ENST00000410182 104 ntBASIC1.27□□□□□ -2.21
CDH13P55290 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH13P55290 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.27□□□□□ -2.21
CDH13P55290 PIGPP3-201ENST00000425307 415 ntBASIC1.27□□□□□ -2.21
CDH13P55290 SNRPGP10-201ENST00000432323 225 ntBASIC1.27□□□□□ -2.21
CDH13P55290 HMGN2P32-201ENST00000444648 269 ntBASIC1.27□□□□□ -2.21
CDH13P55290 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH13P55290 MIR2681-201ENST00000581814 105 ntBASIC1.27□□□□□ -2.21
CDH13P55290 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.27□□□□□ -2.21
CDH13P55290 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
CDH13P55290 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CDH13P55290 ZNF209P-201ENST00000593450 2304 ntBASIC1.26□□□□□ -2.21
CDH13P55290 Y_RNA.105-201ENST00000363182 111 ntBASIC1.26□□□□□ -2.21
CDH13P55290 snoU2-30.1-201ENST00000365012 70 ntBASIC1.26□□□□□ -2.21
CDH13P55290 RNU6-290P-201ENST00000365212 101 ntBASIC1.26□□□□□ -2.21
CDH13P55290 MIR526A1-201ENST00000384897 85 ntBASIC1.26□□□□□ -2.21
CDH13P55290 SNORA17.3-201ENST00000391159 129 ntBASIC1.26□□□□□ -2.21
CDH13P55290 RNU6-1054P-201ENST00000411293 104 ntBASIC1.26□□□□□ -2.21
CDH13P55290 RNU7-141P-201ENST00000459304 62 ntBASIC1.26□□□□□ -2.21
CDH13P55290 RNU6-764P-201ENST00000516396 105 ntBASIC1.26□□□□□ -2.21
CDH13P55290 SNORD45.4-201ENST00000516629 73 ntBASIC1.26□□□□□ -2.21
CDH13P55290 MIR3124-201ENST00000582636 67 ntBASIC1.26□□□□□ -2.21
CDH13P55290 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
CDH13P55290 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH13P55290 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CDH13P55290 Y_RNA.19-201ENST00000362462 99 ntBASIC1.25□□□□□ -2.21
CDH13P55290 RNU6-1084P-201ENST00000362498 107 ntBASIC1.25□□□□□ -2.21
CDH13P55290 Y_RNA.140-201ENST00000363474 103 ntBASIC1.25□□□□□ -2.21
CDH13P55290 Y_RNA.210-201ENST00000364161 110 ntBASIC1.25□□□□□ -2.21
CDH13P55290 Y_RNA.336-201ENST00000365307 109 ntBASIC1.25□□□□□ -2.21
CDH13P55290 RNU6-326P-201ENST00000365480 107 ntBASIC1.25□□□□□ -2.21
CDH13P55290 Y_RNA.422-201ENST00000384054 114 ntBASIC1.25□□□□□ -2.21
CDH13P55290 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CDH13P55290 SNORA53-201ENST00000391141 249 ntBASIC1.25□□□□□ -2.21
CDH13P55290 MIR1298-201ENST00000408783 112 ntBASIC1.25□□□□□ -2.21
CDH13P55290 SNORA36B-201ENST00000410438 131 ntBASIC1.25□□□□□ -2.21
CDH13P55290 MLLT10P1-201ENST00000418346 262 ntBASIC1.25□□□□□ -2.21
CDH13P55290 AC108667.1-201ENST00000428618 249 ntBASIC1.25□□□□□ -2.21
CDH13P55290 DYNLT3P2-201ENST00000442517 295 ntBASIC1.25□□□□□ -2.21
CDH13P55290 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
CDH13P55290 RNY3P15-201ENST00000516297 97 ntBASIC1.25□□□□□ -2.21
CDH13P55290 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
CDH13P55290 FAM106DP-201ENST00000586416 501 ntBASIC1.25□□□□□ -2.21
CDH13P55290 AL512598.1-201ENST00000610158 273 ntBASIC1.25□□□□□ -2.21
CDH13P55290 snoU2_19.2-201ENST00000363024 80 ntBASIC1.24□□□□□ -2.21
CDH13P55290 Y_RNA.153-201ENST00000363615 91 ntBASIC1.24□□□□□ -2.21
CDH13P55290 RNU6-899P-201ENST00000363947 107 ntBASIC1.24□□□□□ -2.21
CDH13P55290 MIR15B-201ENST00000385045 98 ntBASIC1.24□□□□□ -2.21
CDH13P55290 MTCO1P5-201ENST00000433573 344 ntBASIC1.24□□□□□ -2.21
CDH13P55290 AL731563.1-201ENST00000442202 214 ntBASIC1.24□□□□□ -2.21
CDH13P55290 RNU6-437P-201ENST00000459408 95 ntBASIC1.24□□□□□ -2.21
CDH13P55290 RNU2-31P-201ENST00000516954 155 ntBASIC1.24□□□□□ -2.21
CDH13P55290 RNU6-1137P-201ENST00000517073 99 ntBASIC1.24□□□□□ -2.21
CDH13P55290 AC090821.2-201ENST00000523552 176 ntBASIC1.24□□□□□ -2.21
CDH13P55290 AC008269.2-201ENST00000561915 1105 ntBASIC1.24□□□□□ -2.21
CDH13P55290 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH13P55290 AP000942.3-201ENST00000603702 160 ntBASIC1.24□□□□□ -2.21
CDH13P55290 AC037487.3-201ENST00000606668 112 ntBASIC1.24□□□□□ -2.21
CDH13P55290 JPX_2.1-201ENST00000614161 69 ntBASIC1.24□□□□□ -2.21
CDH13P55290 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CDH13P55290 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CDH13P55290 AL442644.1-201ENST00000454390 3105 ntBASIC1.23□□□□□ -2.21
CDH13P55290 SNORD50B-201ENST00000364995 70 ntBASIC1.23□□□□□ -2.21
CDH13P55290 RNU6-144P-201ENST00000383951 107 ntBASIC1.23□□□□□ -2.21
CDH13P55290 SNORA26.5-201ENST00000391215 123 ntBASIC1.23□□□□□ -2.21
CDH13P55290 RNU4-62P-201ENST00000410125 130 ntBASIC1.23□□□□□ -2.21
CDH13P55290 RNU2-14P-201ENST00000411053 191 ntBASIC1.23□□□□□ -2.21
CDH13P55290 RPL39P39-201ENST00000455840 151 ntBASIC1.23□□□□□ -2.21
CDH13P55290 RNA5SP458-201ENST00000516188 119 ntBASIC1.23□□□□□ -2.21
CDH13P55290 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.23□□□□□ -2.21
CDH13P55290 AL512605.2-201ENST00000592972 256 ntBASIC1.23□□□□□ -2.21
CDH13P55290 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.23□□□□□ -2.21
CDH13P55290 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
CDH13P55290 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
CDH13P55290 RNU6-1209P-201ENST00000363655 107 ntBASIC1.22□□□□□ -2.21
CDH13P55290 Y_RNA.796-201ENST00000364268 102 ntBASIC1.22□□□□□ -2.21
CDH13P55290 Y_RNA.799-201ENST00000364992 102 ntBASIC1.22□□□□□ -2.21
CDH13P55290 Y_RNA.541-201ENST00000384640 113 ntBASIC1.22□□□□□ -2.21
CDH13P55290 MIR136-201ENST00000385207 82 ntBASIC1.22□□□□□ -2.21
CDH13P55290 MRPS35P2-201ENST00000508242 191 ntBASIC1.22□□□□□ -2.21
CDH13P55290 SNORA31.4-201ENST00000516049 129 ntBASIC1.22□□□□□ -2.21
CDH13P55290 RNU6-1007P-201ENST00000516586 107 ntBASIC1.22□□□□□ -2.21
CDH13P55290 AP003733.2-201ENST00000529409 171 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms