Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.48□□□□□ -2.17
CDH11P55287 AC242852.1-201ENST00000612151 96 ntBASIC1.48□□□□□ -2.17
CDH11P55287 MIR8074-201ENST00000615081 81 ntBASIC1.48□□□□□ -2.17
CDH11P55287 AC013791.1-201ENST00000616619 62 ntBASIC1.48□□□□□ -2.17
CDH11P55287 U4.1-201ENST00000620349 87 ntBASIC1.48□□□□□ -2.17
CDH11P55287 7SK.10-201ENST00000621414 298 ntBASIC1.48□□□□□ -2.17
CDH11P55287 AC244015.1-201ENST00000622301 99 ntBASIC1.48□□□□□ -2.17
CDH11P55287 snoU18.1-201ENST00000629629 71 ntBASIC1.48□□□□□ -2.17
CDH11P55287 AC134026.1-201ENST00000623249 2239 ntBASIC1.48□□□□□ -2.17
CDH11P55287 MIR302D-201ENST00000362275 68 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.82-201ENST00000363000 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.92-201ENST00000363043 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 RNU6-899P-201ENST00000363947 107 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.235-201ENST00000364412 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 RNU6-740P-201ENST00000364734 105 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.306-201ENST00000365015 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.312-201ENST00000365089 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.322-201ENST00000365151 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.338-201ENST00000365320 114 ntBASIC1.47□□□□□ -2.17
CDH11P55287 RNU6-514P-201ENST00000384208 107 ntBASIC1.47□□□□□ -2.17
CDH11P55287 RNU6-196P-201ENST00000384315 107 ntBASIC1.47□□□□□ -2.17
CDH11P55287 RNU6-424P-201ENST00000384367 105 ntBASIC1.47□□□□□ -2.17
CDH11P55287 MIR30A-201ENST00000385092 71 ntBASIC1.47□□□□□ -2.17
CDH11P55287 RNA5SP482-201ENST00000391269 118 ntBASIC1.47□□□□□ -2.17
CDH11P55287 MIR1302-3-201ENST00000408128 138 ntBASIC1.47□□□□□ -2.17
CDH11P55287 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.47□□□□□ -2.17
CDH11P55287 STAG3L5P-204ENST00000443759 179 ntBASIC1.47□□□□□ -2.17
CDH11P55287 SNORD2.1-201ENST00000458762 69 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.650-201ENST00000459002 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 RNU6-1132P-201ENST00000459214 107 ntBASIC1.47□□□□□ -2.17
CDH11P55287 AC005908.1-201ENST00000468701 347 ntBASIC1.47□□□□□ -2.17
CDH11P55287 RNU2-56P-201ENST00000516826 190 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.777-201ENST00000516982 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 MIR4282-201ENST00000583613 67 ntBASIC1.47□□□□□ -2.17
CDH11P55287 MIR4762-201ENST00000585261 75 ntBASIC1.47□□□□□ -2.17
CDH11P55287 AC005357.1-201ENST00000588399 301 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.771-201ENST00000598668 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 AL591926.4-201ENST00000616895 298 ntBASIC1.47□□□□□ -2.17
CDH11P55287 Y_RNA.789-201ENST00000622480 102 ntBASIC1.47□□□□□ -2.17
CDH11P55287 WWP1P1-201ENST00000466609 2769 ntBASIC1.46□□□□□ -2.18
CDH11P55287 Y_RNA.117-201ENST00000363294 101 ntBASIC1.46□□□□□ -2.18
CDH11P55287 RNU6-674P-201ENST00000363831 107 ntBASIC1.46□□□□□ -2.18
CDH11P55287 U8.5-201ENST00000364528 136 ntBASIC1.46□□□□□ -2.18
CDH11P55287 Y_RNA.253-201ENST00000364562 112 ntBASIC1.46□□□□□ -2.18
CDH11P55287 Y_RNA.288-201ENST00000364854 92 ntBASIC1.46□□□□□ -2.18
CDH11P55287 Y_RNA.352-201ENST00000365439 102 ntBASIC1.46□□□□□ -2.18
CDH11P55287 RNU6-969P-201ENST00000383900 105 ntBASIC1.46□□□□□ -2.18
CDH11P55287 RNU6-1289P-201ENST00000384431 106 ntBASIC1.46□□□□□ -2.18
CDH11P55287 SNORA17.3-201ENST00000391159 129 ntBASIC1.46□□□□□ -2.18
CDH11P55287 SNORD58.1-201ENST00000391313 66 ntBASIC1.46□□□□□ -2.18
CDH11P55287 MTCO2P33-201ENST00000402100 465 ntBASIC1.46□□□□□ -2.18
CDH11P55287 AL034345.1-201ENST00000407768 123 ntBASIC1.46□□□□□ -2.18
CDH11P55287 SNORA36B-201ENST00000410438 131 ntBASIC1.46□□□□□ -2.18
CDH11P55287 RN7SKP101-201ENST00000411376 320 ntBASIC1.46□□□□□ -2.18
CDH11P55287 AC004965.1-201ENST00000413033 213 ntBASIC1.46□□□□□ -2.18
CDH11P55287 RNU7-34P-201ENST00000459394 64 ntBASIC1.46□□□□□ -2.18
CDH11P55287 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.46□□□□□ -2.18
CDH11P55287 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.46□□□□□ -2.18
CDH11P55287 AC015688.6-201ENST00000577737 104 ntBASIC1.46□□□□□ -2.18
CDH11P55287 MIR5692C2-201ENST00000577959 77 ntBASIC1.46□□□□□ -2.18
CDH11P55287 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
CDH11P55287 MIR3149-201ENST00000584629 83 ntBASIC1.46□□□□□ -2.18
CDH11P55287 SNORA28-201ENST00000606769 126 ntBASIC1.46□□□□□ -2.18
CDH11P55287 AL513423.1-201ENST00000621695 132 ntBASIC1.46□□□□□ -2.18
CDH11P55287 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
CDH11P55287 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CDH11P55287 MIR424-201ENST00000362227 98 ntBASIC1.45□□□□□ -2.18
CDH11P55287 RNU6-414P-201ENST00000363705 104 ntBASIC1.45□□□□□ -2.18
CDH11P55287 RNU6-457P-201ENST00000363999 107 ntBASIC1.45□□□□□ -2.18
CDH11P55287 Y_RNA.265-201ENST00000364677 108 ntBASIC1.45□□□□□ -2.18
CDH11P55287 AL603910.2-201ENST00000407268 136 ntBASIC1.45□□□□□ -2.18
CDH11P55287 BTF3P11-201ENST00000426582 477 ntBASIC1.45□□□□□ -2.18
CDH11P55287 CALM2P4-201ENST00000430810 426 ntBASIC1.45□□□□□ -2.18
CDH11P55287 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH11P55287 RNU1-98P-201ENST00000458992 160 ntBASIC1.45□□□□□ -2.18
CDH11P55287 RPL23AP54-201ENST00000495129 419 ntBASIC1.45□□□□□ -2.18
CDH11P55287 AC108729.3-201ENST00000513484 108 ntBASIC1.45□□□□□ -2.18
CDH11P55287 Y_RNA.680-201ENST00000516441 93 ntBASIC1.45□□□□□ -2.18
CDH11P55287 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.45□□□□□ -2.18
CDH11P55287 AC062037.2-201ENST00000610137 73 ntBASIC1.45□□□□□ -2.18
CDH11P55287 AC073349.3-201ENST00000617616 186 ntBASIC1.45□□□□□ -2.18
CDH11P55287 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH11P55287 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CDH11P55287 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CDH11P55287 RNU6-1123P-201ENST00000362347 106 ntBASIC1.44□□□□□ -2.18
CDH11P55287 Y_RNA.122-201ENST00000363331 96 ntBASIC1.44□□□□□ -2.18
CDH11P55287 Y_RNA.203-201ENST00000364106 102 ntBASIC1.44□□□□□ -2.18
CDH11P55287 Y_RNA.796-201ENST00000364268 102 ntBASIC1.44□□□□□ -2.18
CDH11P55287 Y_RNA.799-201ENST00000364992 102 ntBASIC1.44□□□□□ -2.18
CDH11P55287 RNU6-211P-201ENST00000384047 107 ntBASIC1.44□□□□□ -2.18
CDH11P55287 MIR522-201ENST00000385071 87 ntBASIC1.44□□□□□ -2.18
CDH11P55287 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
CDH11P55287 U8.16-201ENST00000391279 133 ntBASIC1.44□□□□□ -2.18
CDH11P55287 MIR1267-201ENST00000408723 78 ntBASIC1.44□□□□□ -2.18
CDH11P55287 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
CDH11P55287 AC008834.1-201ENST00000511612 175 ntBASIC1.44□□□□□ -2.18
CDH11P55287 RNU6-970P-201ENST00000516312 107 ntBASIC1.44□□□□□ -2.18
CDH11P55287 RNA5SP168-201ENST00000516642 112 ntBASIC1.44□□□□□ -2.18
CDH11P55287 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.44□□□□□ -2.18
CDH11P55287 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms