Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.71□□□□□ -1.98
NCKAP1LP55160 MRPS17P9-201ENST00000511924 393 ntBASIC2.71□□□□□ -1.98
NCKAP1LP55160 SNORA4.4-201ENST00000515921 135 ntBASIC2.71□□□□□ -1.98
NCKAP1LP55160 RNU7-99P-201ENST00000516271 62 ntBASIC2.71□□□□□ -1.98
NCKAP1LP55160 SNORA48.11-201ENST00000517015 89 ntBASIC2.71□□□□□ -1.98
NCKAP1LP55160 AC008507.4-201ENST00000585464 127 ntBASIC2.71□□□□□ -1.98
NCKAP1LP55160 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.71□□□□□ -1.98
NCKAP1LP55160 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
NCKAP1LP55160 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
NCKAP1LP55160 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NCKAP1LP55160 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.7□□□□□ -1.98
NCKAP1LP55160 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NCKAP1LP55160 RNU6-32P-201ENST00000383948 107 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 RNU6-13P-201ENST00000384248 107 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 SNORD61-201ENST00000384252 73 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 Y_RNA.495-201ENST00000384435 112 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 RNU6-12P-201ENST00000384604 107 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 SNORA67.4-201ENST00000384688 142 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 RNU6-41P-201ENST00000384741 107 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 HMGN2P34-201ENST00000437647 269 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 AL161788.1-201ENST00000441805 169 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 SCARNA15-202ENST00000516881 127 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.7□□□□□ -1.98
NCKAP1LP55160 AL358944.1-201ENST00000528537 144 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 MIR3129-201ENST00000581095 76 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 AC006254.2-201ENST00000603259 279 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 AL356280.1-201ENST00000603614 379 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 MIR5739-201ENST00000619803 80 ntBASIC2.7□□□□□ -1.98
NCKAP1LP55160 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
NCKAP1LP55160 AC018630.2-201ENST00000534866 2403 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
NCKAP1LP55160 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
NCKAP1LP55160 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NCKAP1LP55160 RNU1-23P-201ENST00000363361 144 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 Y_RNA.253-201ENST00000364562 112 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 RNU6-106P-201ENST00000384405 107 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 MIR548A2-201ENST00000384956 97 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 RNA5SP136-201ENST00000410906 107 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 RPS12P2-201ENST00000439728 269 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 SEM1P1-201ENST00000506694 209 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 AC073413.2-201ENST00000604332 360 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 CTSLP2-204ENST00000629029 392 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 MIR7515-201ENST00000637837 67 ntBASIC2.69□□□□□ -1.98
NCKAP1LP55160 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NCKAP1LP55160 snoU2-30.2-201ENST00000362805 70 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 Y_RNA.116-201ENST00000363292 103 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 Y_RNA.369-201ENST00000365568 117 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 RNU1-109P-201ENST00000383960 147 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 RNU11-5P-201ENST00000391216 129 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 CALM2P4-201ENST00000430810 426 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 AL513328.1-201ENST00000446460 224 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 AL031737.1-201ENST00000450125 223 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 CYP2C59P-201ENST00000457790 269 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 RPS29P24-201ENST00000486345 171 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 RNU6-1146P-201ENST00000516282 102 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 MIR5582-201ENST00000579697 68 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 AC087685.1-201ENST00000587507 141 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 AL353149.1-201ENST00000610667 244 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 U6.108-201ENST00000637764 58 ntBASIC2.68□□□□□ -1.98
NCKAP1LP55160 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
NCKAP1LP55160 SNORD72-201ENST00000390994 80 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 SNORD77.3-201ENST00000391113 65 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 MIR1253-201ENST00000408273 105 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 SNRPGP10-201ENST00000432323 225 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 AL353689.1-201ENST00000438895 199 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 AC104389.3-201ENST00000445629 235 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 AC011406.1-201ENST00000512440 370 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 RNU6-412P-201ENST00000516434 106 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 RNU6-341P-201ENST00000516973 96 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 AC007229.1-201ENST00000590455 412 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 AC103810.6-201ENST00000606708 136 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 uc_338.28-201ENST00000612082 187 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 AC010297.1-201ENST00000623948 149 ntBASIC2.67□□□□□ -1.98
NCKAP1LP55160 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NCKAP1LP55160 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.67□□□□□ -1.98
NCKAP1LP55160 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NCKAP1LP55160 MIR450A1-201ENST00000362262 91 ntBASIC2.66□□□□□ -1.98
NCKAP1LP55160 Y_RNA.242-201ENST00000364473 110 ntBASIC2.66□□□□□ -1.98
NCKAP1LP55160 MIR627-201ENST00000384979 97 ntBASIC2.66□□□□□ -1.98
NCKAP1LP55160 MIR218-1-201ENST00000384999 110 ntBASIC2.66□□□□□ -1.98
NCKAP1LP55160 MIR3199-1-201ENST00000582434 88 ntBASIC2.66□□□□□ -1.98
NCKAP1LP55160 MIR1291-201ENST00000627649 87 ntBASIC2.66□□□□□ -1.98
NCKAP1LP55160 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NCKAP1LP55160 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NCKAP1LP55160 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.66□□□□□ -1.98
NCKAP1LP55160 Y_RNA.85-201ENST00000363014 111 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 VTRNA1-1-201ENST00000363120 99 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 Y_RNA.528-201ENST00000384575 108 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 MIR570-201ENST00000384917 97 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NCKAP1LP55160 RNU6-554P-201ENST00000410466 106 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 RPS26P48-201ENST00000491713 339 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 RNU6-991P-201ENST00000516168 107 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 RNU6-1149P-201ENST00000516810 97 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 AC067747.1-201ENST00000608026 250 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 MIR6079-201ENST00000635807 62 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 MIR338-201ENST00000636369 67 ntBASIC2.65□□□□□ -1.99
NCKAP1LP55160 MIR518F-201ENST00000384973 87 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms