Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL139156.1-201ENST00000412785 841 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 RPL30P13-201ENST00000418873 348 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.73□□□□□ -2.13
NR1H2P55055 RNU6-1132P-201ENST00000459214 107 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 AC079140.2-201ENST00000506193 142 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 AC108729.3-201ENST00000513484 108 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 Y_RNA.668-201ENST00000516233 93 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 RNU7-115P-201ENST00000516433 55 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 RNU7-116P-201ENST00000516940 62 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 AP003357.1-201ENST00000604497 148 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 U2.14-201ENST00000615943 113 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 MIR548AY-201ENST00000617669 107 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 AL513423.1-201ENST00000621695 132 ntBASIC1.73□□□□□ -2.13
NR1H2P55055 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.73□□□□□ -2.13
NR1H2P55055 UBE2WP1-201ENST00000362030 340 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 RNU6-1272P-201ENST00000362776 107 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 Y_RNA.193-201ENST00000363979 102 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 Y_RNA.217-201ENST00000364214 105 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 Y_RNA.265-201ENST00000364677 108 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 RNU6-702P-201ENST00000364982 107 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 RNU6-203P-201ENST00000384038 104 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 BTF3P11-201ENST00000426582 477 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 STAG3L5P-204ENST00000443759 179 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.72□□□□□ -2.13
NR1H2P55055 U8.19-201ENST00000459095 133 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 Y_RNA.641-201ENST00000459414 105 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 Y_RNA.637-201ENST00000459424 114 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 AL049830.1-201ENST00000468034 425 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 RNA5SP445-201ENST00000515889 115 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 AC110588.1-201ENST00000559699 137 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 AC015688.6-201ENST00000577737 104 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 AC021506.2-201ENST00000612354 169 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 AC073349.3-201ENST00000617616 186 ntBASIC1.72□□□□□ -2.13
NR1H2P55055 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
NR1H2P55055 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
NR1H2P55055 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
NR1H2P55055 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
NR1H2P55055 MIR126-201ENST00000362291 85 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 Y_RNA.14-201ENST00000362415 103 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 Y_RNA.117-201ENST00000363294 101 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 Y_RNA.275-201ENST00000364726 110 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 RNU6-740P-201ENST00000364734 105 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 SNORD1A-201ENST00000364968 72 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 RNU6-1289P-201ENST00000384431 106 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 RNA5SP482-201ENST00000391269 118 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 AC108667.1-201ENST00000428618 249 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 RPL23AP54-201ENST00000495129 419 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 AC127455.1-201ENST00000565496 145 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 AC062037.2-201ENST00000610137 73 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 AL078604.3-201ENST00000615580 211 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 snoU18.1-201ENST00000629629 71 ntBASIC1.71□□□□□ -2.14
NR1H2P55055 Y_RNA.54-201ENST00000362766 105 ntBASIC1.7□□□□□ -2.14
NR1H2P55055 RNU6-899P-201ENST00000363947 107 ntBASIC1.7□□□□□ -2.14
NR1H2P55055 MIR513A1-201ENST00000385138 129 ntBASIC1.7□□□□□ -2.14
NR1H2P55055 AL603910.2-201ENST00000407268 136 ntBASIC1.7□□□□□ -2.14
NR1H2P55055 SNORA36B-201ENST00000410438 131 ntBASIC1.7□□□□□ -2.14
NR1H2P55055 RPL39P38-201ENST00000467018 153 ntBASIC1.7□□□□□ -2.14
NR1H2P55055 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.7□□□□□ -2.14
NR1H2P55055 AC095038.3-201ENST00000634439 195 ntBASIC1.7□□□□□ -2.14
NR1H2P55055 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NR1H2P55055 MIR302D-201ENST00000362275 68 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 Y_RNA.352-201ENST00000365439 102 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 SNORA12.1-201ENST00000390873 148 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 SNORA17.3-201ENST00000391159 129 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.69□□□□□ -2.14
NR1H2P55055 AC099513.1-201ENST00000490423 301 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 RNU6-1053P-201ENST00000515930 101 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 RNU6-902P-201ENST00000517212 91 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.69□□□□□ -2.14
NR1H2P55055 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 AC013791.1-201ENST00000616619 62 ntBASIC1.69□□□□□ -2.14
NR1H2P55055 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NR1H2P55055 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NR1H2P55055 RNU4-41P-201ENST00000364426 143 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 Y_RNA.277-201ENST00000364754 102 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 Y_RNA.477-201ENST00000384352 108 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 Y_RNA.562-201ENST00000384695 113 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 RNU6-651P-201ENST00000411040 105 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 SNX2P2-201ENST00000424553 323 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 AC027119.1-201ENST00000440877 241 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 AC004817.2-201ENST00000561794 651 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 MIR5692C2-201ENST00000577959 77 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 MIR4781-201ENST00000585250 76 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 AL008718.3-201ENST00000610217 321 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 MIR8081-201ENST00000611533 95 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 AL121890.5-201ENST00000620848 304 ntBASIC1.68□□□□□ -2.14
NR1H2P55055 RNU6-1205P-201ENST00000363625 106 ntBASIC1.67□□□□□ -2.14
NR1H2P55055 Y_RNA.350-201ENST00000365409 98 ntBASIC1.67□□□□□ -2.14
NR1H2P55055 RNA5SP259-201ENST00000365541 109 ntBASIC1.67□□□□□ -2.14
NR1H2P55055 RNU6-211P-201ENST00000384047 107 ntBASIC1.67□□□□□ -2.14
NR1H2P55055 MIR548H3-201ENST00000408771 118 ntBASIC1.67□□□□□ -2.14
NR1H2P55055 Z98949.2-201ENST00000440996 144 ntBASIC1.67□□□□□ -2.14
NR1H2P55055 OR9P1P-201ENST00000496431 281 ntBASIC1.67□□□□□ -2.14
NR1H2P55055 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms