Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MIR5009-201ENST00000578736 100 ntBASIC3.16□□□□□ -1.9
EPHA4P54764 uc_338.1-201ENST00000612113 180 ntBASIC3.16□□□□□ -1.9
EPHA4P54764 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
EPHA4P54764 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
EPHA4P54764 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
EPHA4P54764 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EPHA4P54764 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
EPHA4P54764 RNU6-905P-201ENST00000384434 107 ntBASIC3.15□□□□□ -1.91
EPHA4P54764 MIR627-201ENST00000384979 97 ntBASIC3.15□□□□□ -1.91
EPHA4P54764 AL035398.1-201ENST00000430869 322 ntBASIC3.15□□□□□ -1.91
EPHA4P54764 MIR3683-201ENST00000580847 82 ntBASIC3.15□□□□□ -1.91
EPHA4P54764 MIR4305-201ENST00000583252 102 ntBASIC3.15□□□□□ -1.91
EPHA4P54764 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.15□□□□□ -1.91
EPHA4P54764 RNA5SP374-201ENST00000362939 125 ntBASIC3.14□□□□□ -1.91
EPHA4P54764 RNU6-950P-201ENST00000384651 107 ntBASIC3.14□□□□□ -1.91
EPHA4P54764 RNU6-440P-201ENST00000390882 105 ntBASIC3.14□□□□□ -1.91
EPHA4P54764 RNA5SP109-201ENST00000391010 116 ntBASIC3.14□□□□□ -1.91
EPHA4P54764 RN7SKP220-201ENST00000410611 288 ntBASIC3.14□□□□□ -1.91
EPHA4P54764 RN7SL863P-201ENST00000462370 296 ntBASIC3.14□□□□□ -1.91
EPHA4P54764 AC068339.1-201ENST00000526965 141 ntBASIC3.14□□□□□ -1.91
EPHA4P54764 MIR8054-201ENST00000620877 86 ntBASIC3.14□□□□□ -1.91
EPHA4P54764 AC091932.4-201ENST00000623386 200 ntBASIC3.14□□□□□ -1.91
EPHA4P54764 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
EPHA4P54764 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
EPHA4P54764 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.14□□□□□ -1.91
EPHA4P54764 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.13□□□□□ -1.91
EPHA4P54764 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
EPHA4P54764 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.13□□□□□ -1.91
EPHA4P54764 RNU1-70P-201ENST00000362618 164 ntBASIC3.13□□□□□ -1.91
EPHA4P54764 RNU6-1019P-201ENST00000364424 107 ntBASIC3.13□□□□□ -1.91
EPHA4P54764 U8.6-201ENST00000364939 135 ntBASIC3.13□□□□□ -1.91
EPHA4P54764 NDUFB4P4-201ENST00000404822 243 ntBASIC3.13□□□□□ -1.91
EPHA4P54764 RNA5SP229-201ENST00000410809 99 ntBASIC3.13□□□□□ -1.91
EPHA4P54764 SNX2P2-201ENST00000424553 323 ntBASIC3.13□□□□□ -1.91
EPHA4P54764 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.13□□□□□ -1.91
EPHA4P54764 AC114811.1-201ENST00000507207 168 ntBASIC3.13□□□□□ -1.91
EPHA4P54764 RNU7-123P-201ENST00000515911 60 ntBASIC3.13□□□□□ -1.91
EPHA4P54764 AC027279.3-201ENST00000625055 122 ntBASIC3.13□□□□□ -1.91
EPHA4P54764 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
EPHA4P54764 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EPHA4P54764 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
EPHA4P54764 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.12□□□□□ -1.91
EPHA4P54764 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
EPHA4P54764 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EPHA4P54764 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
EPHA4P54764 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
EPHA4P54764 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
EPHA4P54764 MIR302B-201ENST00000362188 73 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 MIR342-201ENST00000362212 99 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 RNU1-58P-201ENST00000362413 163 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 MIR548D2-201ENST00000384955 97 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 RNU6-938P-201ENST00000411285 103 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 AL606517.2-201ENST00000442855 241 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 RNU6-830P-201ENST00000516353 107 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.12□□□□□ -1.91
EPHA4P54764 AC078899.2-201ENST00000595282 212 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.12□□□□□ -1.91
EPHA4P54764 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 Y_RNA.818-201ENST00000618813 71 ntBASIC3.12□□□□□ -1.91
EPHA4P54764 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
EPHA4P54764 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
EPHA4P54764 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EPHA4P54764 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
EPHA4P54764 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
EPHA4P54764 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
EPHA4P54764 RNU6-640P-201ENST00000363693 105 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 Y_RNA.241-201ENST00000364470 117 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 RNU1-91P-201ENST00000364746 163 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 RNU6-294P-201ENST00000364999 102 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
EPHA4P54764 RN7SKP200-201ENST00000410564 320 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 AC104389.3-201ENST00000445629 235 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 AC084364.2-201ENST00000546924 395 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.11□□□□□ -1.91
EPHA4P54764 MIR3126-201ENST00000577443 74 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 MIR2682-201ENST00000580305 110 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 MIR2052-201ENST00000636055 55 ntBASIC3.11□□□□□ -1.91
EPHA4P54764 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
EPHA4P54764 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
EPHA4P54764 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
EPHA4P54764 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
EPHA4P54764 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
EPHA4P54764 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
EPHA4P54764 SNORA7.4-201ENST00000384249 137 ntBASIC3.1□□□□□ -1.91
EPHA4P54764 SNORA27-201ENST00000384323 126 ntBASIC3.1□□□□□ -1.91
EPHA4P54764 MIR128-1-201ENST00000384921 82 ntBASIC3.1□□□□□ -1.91
EPHA4P54764 SNORA48.2-201ENST00000390926 124 ntBASIC3.1□□□□□ -1.91
EPHA4P54764 AL034345.1-201ENST00000407768 123 ntBASIC3.1□□□□□ -1.91
EPHA4P54764 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
EPHA4P54764 HMGN1P18-201ENST00000457642 277 ntBASIC3.1□□□□□ -1.91
EPHA4P54764 SNORA64.4-201ENST00000516632 81 ntBASIC3.1□□□□□ -1.91
EPHA4P54764 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHA4P54764 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
EPHA4P54764 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
EPHA4P54764 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EPHA4P54764 MIR148B-201ENST00000362252 99 ntBASIC3.09□□□□□ -1.91
EPHA4P54764 Y_RNA.78-201ENST00000362970 110 ntBASIC3.09□□□□□ -1.91
EPHA4P54764 SNORA25.6-201ENST00000364121 118 ntBASIC3.09□□□□□ -1.91
EPHA4P54764 SNORA51.10-201ENST00000384418 136 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms