Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.04□□□□□ -2.08
COPAP53621 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COPAP53621 MIR367-201ENST00000362299 68 ntBASIC2.03□□□□□ -2.08
COPAP53621 RNU6-200P-201ENST00000364743 107 ntBASIC2.03□□□□□ -2.08
COPAP53621 SNORA8.3-201ENST00000384679 139 ntBASIC2.03□□□□□ -2.08
COPAP53621 SNORA26.9-201ENST00000391322 122 ntBASIC2.03□□□□□ -2.08
COPAP53621 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.03□□□□□ -2.08
COPAP53621 HSPE1P9-201ENST00000440046 311 ntBASIC2.03□□□□□ -2.08
COPAP53621 RPS27P1-201ENST00000450552 247 ntBASIC2.03□□□□□ -2.08
COPAP53621 RNU6-437P-201ENST00000459408 95 ntBASIC2.03□□□□□ -2.08
COPAP53621 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.03□□□□□ -2.08
COPAP53621 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.03□□□□□ -2.08
COPAP53621 RNA5SP481-201ENST00000516814 122 ntBASIC2.03□□□□□ -2.08
COPAP53621 RNU2-56P-201ENST00000516826 190 ntBASIC2.03□□□□□ -2.08
COPAP53621 AP002004.2-201ENST00000531656 154 ntBASIC2.03□□□□□ -2.08
COPAP53621 AC130289.1-201ENST00000577321 73 ntBASIC2.03□□□□□ -2.08
COPAP53621 MIR4724-201ENST00000579485 89 ntBASIC2.03□□□□□ -2.08
COPAP53621 AC011921.3-201ENST00000605540 361 ntBASIC2.03□□□□□ -2.08
COPAP53621 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COPAP53621 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COPAP53621 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.02□□□□□ -2.09
COPAP53621 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COPAP53621 SNORA4.2-201ENST00000365313 147 ntBASIC2.02□□□□□ -2.09
COPAP53621 RNU6-950P-201ENST00000384651 107 ntBASIC2.02□□□□□ -2.09
COPAP53621 AC009310.1-201ENST00000414414 451 ntBASIC2.02□□□□□ -2.09
COPAP53621 RPL31P63-201ENST00000422565 375 ntBASIC2.02□□□□□ -2.09
COPAP53621 RNU6-548P-201ENST00000517083 115 ntBASIC2.02□□□□□ -2.09
COPAP53621 AL358944.1-201ENST00000528537 144 ntBASIC2.02□□□□□ -2.09
COPAP53621 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.02□□□□□ -2.09
COPAP53621 AC022254.1-201ENST00000567857 235 ntBASIC2.02□□□□□ -2.09
COPAP53621 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.02□□□□□ -2.09
COPAP53621 MIR3198-2-201ENST00000577868 80 ntBASIC2.02□□□□□ -2.09
COPAP53621 MIR8054-201ENST00000620877 86 ntBASIC2.02□□□□□ -2.09
COPAP53621 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
COPAP53621 Y_RNA.297-201ENST00000364950 91 ntBASIC2.01□□□□□ -2.09
COPAP53621 RNU6-440P-201ENST00000390882 105 ntBASIC2.01□□□□□ -2.09
COPAP53621 COX6CP10-201ENST00000416832 224 ntBASIC2.01□□□□□ -2.09
COPAP53621 CYCSP49-201ENST00000420810 319 ntBASIC2.01□□□□□ -2.09
COPAP53621 AL603825.1-201ENST00000438481 80 ntBASIC2.01□□□□□ -2.09
COPAP53621 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.01□□□□□ -2.09
COPAP53621 RNU6-138P-201ENST00000515952 107 ntBASIC2.01□□□□□ -2.09
COPAP53621 AC100767.1-201ENST00000528178 123 ntBASIC2.01□□□□□ -2.09
COPAP53621 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.01□□□□□ -2.09
COPAP53621 AL353997.5-201ENST00000618886 171 ntBASIC2.01□□□□□ -2.09
COPAP53621 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
COPAP53621 MIR411-201ENST00000362239 96 ntBASIC2□□□□□ -2.09
COPAP53621 RNU6-674P-201ENST00000363831 107 ntBASIC2□□□□□ -2.09
COPAP53621 Y_RNA.274-201ENST00000364714 101 ntBASIC2□□□□□ -2.09
COPAP53621 Y_RNA.308-201ENST00000365043 101 ntBASIC2□□□□□ -2.09
COPAP53621 RNU4-17P-201ENST00000365598 141 ntBASIC2□□□□□ -2.09
COPAP53621 RNU6-1080P-201ENST00000383982 107 ntBASIC2□□□□□ -2.09
COPAP53621 MIR526A2-201ENST00000390198 65 ntBASIC2□□□□□ -2.09
COPAP53621 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
COPAP53621 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2□□□□□ -2.09
COPAP53621 RNU7-34P-201ENST00000459394 64 ntBASIC2□□□□□ -2.09
COPAP53621 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
COPAP53621 AC008834.1-201ENST00000511612 175 ntBASIC2□□□□□ -2.09
COPAP53621 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2□□□□□ -2.09
COPAP53621 Y_RNA.700-201ENST00000516806 100 ntBASIC2□□□□□ -2.09
COPAP53621 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
COPAP53621 MIR5688-201ENST00000580619 83 ntBASIC2□□□□□ -2.09
COPAP53621 MIR2681-201ENST00000581814 105 ntBASIC2□□□□□ -2.09
COPAP53621 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
COPAP53621 AL929325.1-201ENST00000603096 117 ntBASIC2□□□□□ -2.09
COPAP53621 Z83818.1-201ENST00000603584 150 ntBASIC2□□□□□ -2.09
COPAP53621 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
COPAP53621 SNORA1B-201ENST00000362535 133 ntBASIC1.99□□□□□ -2.09
COPAP53621 RNU6-653P-201ENST00000363074 106 ntBASIC1.99□□□□□ -2.09
COPAP53621 Y_RNA.203-201ENST00000364106 102 ntBASIC1.99□□□□□ -2.09
COPAP53621 Y_RNA.265-201ENST00000364677 108 ntBASIC1.99□□□□□ -2.09
COPAP53621 MIR583-201ENST00000384846 75 ntBASIC1.99□□□□□ -2.09
COPAP53621 AC019129.1-201ENST00000403786 261 ntBASIC1.99□□□□□ -2.09
COPAP53621 RN7SKP200-201ENST00000410564 320 ntBASIC1.99□□□□□ -2.09
COPAP53621 AL138752.1-201ENST00000452964 351 ntBASIC1.99□□□□□ -2.09
COPAP53621 snoU13.27-201ENST00000459278 104 ntBASIC1.99□□□□□ -2.09
COPAP53621 AL049830.1-201ENST00000468034 425 ntBASIC1.99□□□□□ -2.09
COPAP53621 RNA5SP182-201ENST00000516064 82 ntBASIC1.99□□□□□ -2.09
COPAP53621 SNORA31.10-201ENST00000516482 106 ntBASIC1.99□□□□□ -2.09
COPAP53621 MIR4709-201ENST00000577272 72 ntBASIC1.99□□□□□ -2.09
COPAP53621 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
COPAP53621 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
COPAP53621 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.98□□□□□ -2.09
COPAP53621 Y_RNA.24-201ENST00000362508 103 ntBASIC1.98□□□□□ -2.09
COPAP53621 RNU4-10P-201ENST00000364383 140 ntBASIC1.98□□□□□ -2.09
COPAP53621 RNU4-41P-201ENST00000364426 143 ntBASIC1.98□□□□□ -2.09
COPAP53621 RNU6-923P-201ENST00000364753 107 ntBASIC1.98□□□□□ -2.09
COPAP53621 MIR626-201ENST00000385032 94 ntBASIC1.98□□□□□ -2.09
COPAP53621 RNU6-493P-201ENST00000391321 108 ntBASIC1.98□□□□□ -2.09
COPAP53621 MIR934-201ENST00000401241 83 ntBASIC1.98□□□□□ -2.09
COPAP53621 Y_RNA.793-201ENST00000411222 111 ntBASIC1.98□□□□□ -2.09
COPAP53621 MTND5P15-201ENST00000434246 349 ntBASIC1.98□□□□□ -2.09
COPAP53621 STAG3L5P-204ENST00000443759 179 ntBASIC1.98□□□□□ -2.09
COPAP53621 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.98□□□□□ -2.09
COPAP53621 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.98□□□□□ -2.09
COPAP53621 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
COPAP53621 JPX_2.1-201ENST00000614161 69 ntBASIC1.98□□□□□ -2.09
COPAP53621 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
COPAP53621 AC068700.1-201ENST00000565862 3754 ntBASIC1.98□□□□□ -2.09
COPAP53621 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COPAP53621 Y_RNA.29-201ENST00000362570 113 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms