Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL359851.1-201ENST00000569460 4997 ntBASIC2.09□□□□□ -2.08
COPB1P53618 Y_RNA.229-201ENST00000364347 113 ntBASIC2.08□□□□□ -2.08
COPB1P53618 RNU6-1062P-201ENST00000383908 107 ntBASIC2.08□□□□□ -2.08
COPB1P53618 MIR597-201ENST00000384968 97 ntBASIC2.08□□□□□ -2.08
COPB1P53618 MIR520G-201ENST00000385064 90 ntBASIC2.08□□□□□ -2.08
COPB1P53618 AC091021.1-201ENST00000468051 388 ntBASIC2.08□□□□□ -2.08
COPB1P53618 AL163195.1-201ENST00000496941 348 ntBASIC2.08□□□□□ -2.08
COPB1P53618 RNU6-453P-201ENST00000516819 85 ntBASIC2.08□□□□□ -2.08
COPB1P53618 MRPS18CP4-201ENST00000535821 231 ntBASIC2.08□□□□□ -2.08
COPB1P53618 AC011604.1-201ENST00000545978 196 ntBASIC2.08□□□□□ -2.08
COPB1P53618 RNU2-4P-201ENST00000606190 192 ntBASIC2.08□□□□□ -2.08
COPB1P53618 MIR6079-201ENST00000635807 62 ntBASIC2.08□□□□□ -2.08
COPB1P53618 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
COPB1P53618 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COPB1P53618 AC018630.2-201ENST00000534866 2403 ntBASIC2.08□□□□□ -2.08
COPB1P53618 AC131280.1-202ENST00000624067 4211 ntBASIC2.07□□□□□ -2.08
COPB1P53618 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
COPB1P53618 RNA5SP99-201ENST00000364020 114 ntBASIC2.07□□□□□ -2.08
COPB1P53618 Y_RNA.464-201ENST00000384282 110 ntBASIC2.07□□□□□ -2.08
COPB1P53618 RNU4-70P-201ENST00000384579 139 ntBASIC2.07□□□□□ -2.08
COPB1P53618 MIR616-201ENST00000385293 97 ntBASIC2.07□□□□□ -2.08
COPB1P53618 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
COPB1P53618 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
COPB1P53618 MIR367-201ENST00000362299 68 ntBASIC2.06□□□□□ -2.08
COPB1P53618 Y_RNA.75-201ENST00000362927 97 ntBASIC2.06□□□□□ -2.08
COPB1P53618 RNU6-103P-201ENST00000363686 107 ntBASIC2.06□□□□□ -2.08
COPB1P53618 Y_RNA.203-201ENST00000364106 102 ntBASIC2.06□□□□□ -2.08
COPB1P53618 Y_RNA.412-201ENST00000384001 104 ntBASIC2.06□□□□□ -2.08
COPB1P53618 SNORA8-201ENST00000384574 139 ntBASIC2.06□□□□□ -2.08
COPB1P53618 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
COPB1P53618 RNU11-3P-201ENST00000391111 133 ntBASIC2.06□□□□□ -2.08
COPB1P53618 RN7SKP101-201ENST00000411376 320 ntBASIC2.06□□□□□ -2.08
COPB1P53618 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COPB1P53618 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COPB1P53618 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
COPB1P53618 Y_RNA.662-201ENST00000516028 97 ntBASIC2.06□□□□□ -2.08
COPB1P53618 RNU6-341P-201ENST00000516973 96 ntBASIC2.06□□□□□ -2.08
COPB1P53618 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.06□□□□□ -2.08
COPB1P53618 MIR4744-201ENST00000581563 82 ntBASIC2.06□□□□□ -2.08
COPB1P53618 AL021707.8-201ENST00000609428 183 ntBASIC2.06□□□□□ -2.08
COPB1P53618 AL391903.3-201ENST00000612158 163 ntBASIC2.06□□□□□ -2.08
COPB1P53618 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COPB1P53618 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
COPB1P53618 Y_RNA.441-201ENST00000384123 112 ntBASIC2.05□□□□□ -2.08
COPB1P53618 RNA5SP465-201ENST00000391195 109 ntBASIC2.05□□□□□ -2.08
COPB1P53618 AC019129.1-201ENST00000403786 261 ntBASIC2.05□□□□□ -2.08
COPB1P53618 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
COPB1P53618 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
COPB1P53618 AC245047.4-201ENST00000433189 144 ntBASIC2.05□□□□□ -2.08
COPB1P53618 RPS27P1-201ENST00000450552 247 ntBASIC2.05□□□□□ -2.08
COPB1P53618 Y_RNA.676-201ENST00000516393 96 ntBASIC2.05□□□□□ -2.08
COPB1P53618 RNU6-1212P-201ENST00000517023 104 ntBASIC2.05□□□□□ -2.08
COPB1P53618 AC022217.4-201ENST00000604389 163 ntBASIC2.05□□□□□ -2.08
COPB1P53618 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
COPB1P53618 Y_RNA.182-201ENST00000363880 111 ntBASIC2.04□□□□□ -2.08
COPB1P53618 SNORA16.1-201ENST00000364597 132 ntBASIC2.04□□□□□ -2.08
COPB1P53618 MT-TT-201ENST00000387460 66 ntBASIC2.04□□□□□ -2.08
COPB1P53618 RNU6-578P-201ENST00000390980 103 ntBASIC2.04□□□□□ -2.08
COPB1P53618 RNA5SP323-201ENST00000391094 133 ntBASIC2.04□□□□□ -2.08
COPB1P53618 RNU11-5P-201ENST00000391216 129 ntBASIC2.04□□□□□ -2.08
COPB1P53618 RNA5SP496-201ENST00000391240 109 ntBASIC2.04□□□□□ -2.08
COPB1P53618 RNA5SP270-201ENST00000411361 118 ntBASIC2.04□□□□□ -2.08
COPB1P53618 AL606517.2-201ENST00000442855 241 ntBASIC2.04□□□□□ -2.08
COPB1P53618 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.04□□□□□ -2.08
COPB1P53618 AC245047.8-201ENST00000456455 284 ntBASIC2.04□□□□□ -2.08
COPB1P53618 RNU6-1291P-201ENST00000516591 104 ntBASIC2.04□□□□□ -2.08
COPB1P53618 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
COPB1P53618 SNORA31.25-201ENST00000517242 134 ntBASIC2.04□□□□□ -2.08
COPB1P53618 AL358944.1-201ENST00000528537 144 ntBASIC2.04□□□□□ -2.08
COPB1P53618 AC108706.1-201ENST00000611053 297 ntBASIC2.04□□□□□ -2.08
COPB1P53618 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
COPB1P53618 Y_RNA.796-201ENST00000364268 102 ntBASIC2.03□□□□□ -2.08
COPB1P53618 RNU6-312P-201ENST00000364629 107 ntBASIC2.03□□□□□ -2.08
COPB1P53618 RNU6-275P-201ENST00000364910 107 ntBASIC2.03□□□□□ -2.08
COPB1P53618 Y_RNA.799-201ENST00000364992 102 ntBASIC2.03□□□□□ -2.08
COPB1P53618 RNU6-394P-201ENST00000410735 107 ntBASIC2.03□□□□□ -2.08
COPB1P53618 RNU5E-9P-201ENST00000411164 104 ntBASIC2.03□□□□□ -2.08
COPB1P53618 RNU7-94P-201ENST00000459576 63 ntBASIC2.03□□□□□ -2.08
COPB1P53618 RNVU1-2-201ENST00000516326 135 ntBASIC2.03□□□□□ -2.08
COPB1P53618 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
COPB1P53618 AC084364.2-201ENST00000546924 395 ntBASIC2.03□□□□□ -2.08
COPB1P53618 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.03□□□□□ -2.08
COPB1P53618 ZNF355P-201ENST00000427301 3216 ntBASIC2.03□□□□□ -2.08
COPB1P53618 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COPB1P53618 Y_RNA.23-201ENST00000362496 106 ntBASIC2.02□□□□□ -2.09
COPB1P53618 RNU6-1209P-201ENST00000363655 107 ntBASIC2.02□□□□□ -2.09
COPB1P53618 RNU6-1019P-201ENST00000364424 107 ntBASIC2.02□□□□□ -2.09
COPB1P53618 RNU6-1080P-201ENST00000383982 107 ntBASIC2.02□□□□□ -2.09
COPB1P53618 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COPB1P53618 SNORA48.1-201ENST00000390879 135 ntBASIC2.02□□□□□ -2.09
COPB1P53618 RNU6-1228P-201ENST00000391014 107 ntBASIC2.02□□□□□ -2.09
COPB1P53618 RNU6-1135P-201ENST00000411083 103 ntBASIC2.02□□□□□ -2.09
COPB1P53618 SNORD11-201ENST00000459124 84 ntBASIC2.02□□□□□ -2.09
COPB1P53618 Y_RNA.797-201ENST00000515977 94 ntBASIC2.02□□□□□ -2.09
COPB1P53618 RNU6-255P-201ENST00000516957 105 ntBASIC2.02□□□□□ -2.09
COPB1P53618 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.02□□□□□ -2.09
COPB1P53618 MIR5094-201ENST00000578766 85 ntBASIC2.02□□□□□ -2.09
COPB1P53618 SNORA1B-201ENST00000362535 133 ntBASIC2.01□□□□□ -2.09
COPB1P53618 RNU4-41P-201ENST00000364426 143 ntBASIC2.01□□□□□ -2.09
COPB1P53618 SNORA16B-201ENST00000364674 135 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms