Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MTND2P23-201ENST00000422990 651 ntBASIC1.44□□□□□ -2.18
PDX1P52945 AC024067.1-201ENST00000426199 223 ntBASIC1.44□□□□□ -2.18
PDX1P52945 Z98949.2-201ENST00000440996 144 ntBASIC1.44□□□□□ -2.18
PDX1P52945 AL049830.1-201ENST00000468034 425 ntBASIC1.44□□□□□ -2.18
PDX1P52945 RNU6-1143P-201ENST00000516125 104 ntBASIC1.44□□□□□ -2.18
PDX1P52945 AC019176.1-201ENST00000518519 225 ntBASIC1.44□□□□□ -2.18
PDX1P52945 AL358944.1-201ENST00000528537 144 ntBASIC1.44□□□□□ -2.18
PDX1P52945 AC024405.2-202ENST00000532731 184 ntBASIC1.44□□□□□ -2.18
PDX1P52945 AL117187.1-201ENST00000555482 181 ntBASIC1.44□□□□□ -2.18
PDX1P52945 MIR4778-201ENST00000577635 80 ntBASIC1.44□□□□□ -2.18
PDX1P52945 AC136443.5-201ENST00000603741 370 ntBASIC1.44□□□□□ -2.18
PDX1P52945 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.44□□□□□ -2.18
PDX1P52945 AC073349.3-201ENST00000617616 186 ntBASIC1.44□□□□□ -2.18
PDX1P52945 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PDX1P52945 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
PDX1P52945 RNU6-1123P-201ENST00000362347 106 ntBASIC1.43□□□□□ -2.18
PDX1P52945 Y_RNA.116-201ENST00000363292 103 ntBASIC1.43□□□□□ -2.18
PDX1P52945 RNU6-238P-201ENST00000363313 106 ntBASIC1.43□□□□□ -2.18
PDX1P52945 Y_RNA.253-201ENST00000364562 112 ntBASIC1.43□□□□□ -2.18
PDX1P52945 U8.7-201ENST00000364940 136 ntBASIC1.43□□□□□ -2.18
PDX1P52945 SNORA72.4-201ENST00000384174 132 ntBASIC1.43□□□□□ -2.18
PDX1P52945 SNORA72-201ENST00000384339 132 ntBASIC1.43□□□□□ -2.18
PDX1P52945 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
PDX1P52945 RNU6-1203P-201ENST00000410703 110 ntBASIC1.43□□□□□ -2.18
PDX1P52945 RNU7-141P-201ENST00000459304 62 ntBASIC1.43□□□□□ -2.18
PDX1P52945 AC117454.1-201ENST00000491120 168 ntBASIC1.43□□□□□ -2.18
PDX1P52945 AC091959.1-201ENST00000495857 238 ntBASIC1.43□□□□□ -2.18
PDX1P52945 RNA5SP168-201ENST00000516642 112 ntBASIC1.43□□□□□ -2.18
PDX1P52945 RNU2-31P-201ENST00000516954 155 ntBASIC1.43□□□□□ -2.18
PDX1P52945 RNU6-1116P-201ENST00000517269 99 ntBASIC1.43□□□□□ -2.18
PDX1P52945 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.43□□□□□ -2.18
PDX1P52945 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.43□□□□□ -2.18
PDX1P52945 SNORA28-201ENST00000606769 126 ntBASIC1.43□□□□□ -2.18
PDX1P52945 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.43□□□□□ -2.18
PDX1P52945 AP001282.2-201ENST00000616149 309 ntBASIC1.43□□□□□ -2.18
PDX1P52945 AL591926.4-201ENST00000616895 298 ntBASIC1.43□□□□□ -2.18
PDX1P52945 MIR548AY-201ENST00000617669 107 ntBASIC1.43□□□□□ -2.18
PDX1P52945 AL513423.1-201ENST00000621695 132 ntBASIC1.43□□□□□ -2.18
PDX1P52945 AC068700.1-201ENST00000565862 3754 ntBASIC1.43□□□□□ -2.18
PDX1P52945 AC134026.1-201ENST00000623249 2239 ntBASIC1.42□□□□□ -2.18
PDX1P52945 RNU6-1323P-201ENST00000384025 107 ntBASIC1.42□□□□□ -2.18
PDX1P52945 RNU6-713P-201ENST00000384761 107 ntBASIC1.42□□□□□ -2.18
PDX1P52945 Y_RNA.574-201ENST00000384766 95 ntBASIC1.42□□□□□ -2.18
PDX1P52945 MIR660-201ENST00000385235 97 ntBASIC1.42□□□□□ -2.18
PDX1P52945 RNU6-763P-201ENST00000390865 106 ntBASIC1.42□□□□□ -2.18
PDX1P52945 RNA5SP482-201ENST00000391269 118 ntBASIC1.42□□□□□ -2.18
PDX1P52945 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
PDX1P52945 RNU6-1338P-201ENST00000516328 91 ntBASIC1.42□□□□□ -2.18
PDX1P52945 RNU7-115P-201ENST00000516433 55 ntBASIC1.42□□□□□ -2.18
PDX1P52945 SUMO2P16-201ENST00000519475 264 ntBASIC1.42□□□□□ -2.18
PDX1P52945 AC136628.3-201ENST00000521868 290 ntBASIC1.42□□□□□ -2.18
PDX1P52945 AC127455.1-201ENST00000565496 145 ntBASIC1.42□□□□□ -2.18
PDX1P52945 POLR3GP1-201ENST00000594073 261 ntBASIC1.42□□□□□ -2.18
PDX1P52945 AL162424.1-201ENST00000602325 221 ntBASIC1.42□□□□□ -2.18
PDX1P52945 AP003357.1-201ENST00000604497 148 ntBASIC1.42□□□□□ -2.18
PDX1P52945 AL353621.2-201ENST00000605340 133 ntBASIC1.42□□□□□ -2.18
PDX1P52945 PRR13P7-201ENST00000605538 430 ntBASIC1.42□□□□□ -2.18
PDX1P52945 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PDX1P52945 MIR126-201ENST00000362291 85 ntBASIC1.41□□□□□ -2.18
PDX1P52945 SNORA25.1-201ENST00000362326 128 ntBASIC1.41□□□□□ -2.18
PDX1P52945 RNU6-1309P-201ENST00000363305 108 ntBASIC1.41□□□□□ -2.18
PDX1P52945 SNORD1A-201ENST00000364968 72 ntBASIC1.41□□□□□ -2.18
PDX1P52945 Y_RNA.376-201ENST00000365638 108 ntBASIC1.41□□□□□ -2.18
PDX1P52945 Y_RNA.459-201ENST00000384251 102 ntBASIC1.41□□□□□ -2.18
PDX1P52945 Y_RNA.483-201ENST00000384380 101 ntBASIC1.41□□□□□ -2.18
PDX1P52945 RNU6-997P-201ENST00000384725 107 ntBASIC1.41□□□□□ -2.18
PDX1P52945 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
PDX1P52945 MT-TW-201ENST00000387382 68 ntBASIC1.41□□□□□ -2.18
PDX1P52945 MIR934-201ENST00000401241 83 ntBASIC1.41□□□□□ -2.18
PDX1P52945 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
PDX1P52945 AL358176.2-201ENST00000425769 204 ntBASIC1.41□□□□□ -2.18
PDX1P52945 RNU6-327P-201ENST00000516270 127 ntBASIC1.41□□□□□ -2.18
PDX1P52945 RNU7-28P-201ENST00000516759 62 ntBASIC1.41□□□□□ -2.18
PDX1P52945 SCARNA24.2-201ENST00000516968 130 ntBASIC1.41□□□□□ -2.18
PDX1P52945 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
PDX1P52945 DEFB108E-201ENST00000524692 240 ntBASIC1.41□□□□□ -2.18
PDX1P52945 AC008269.2-201ENST00000561915 1105 ntBASIC1.41□□□□□ -2.18
PDX1P52945 MIR4285-201ENST00000581001 85 ntBASIC1.41□□□□□ -2.18
PDX1P52945 AC005357.1-201ENST00000588399 301 ntBASIC1.41□□□□□ -2.18
PDX1P52945 AL365434.2-201ENST00000607979 234 ntBASIC1.41□□□□□ -2.18
PDX1P52945 SNORD3E-202ENST00000627253 216 ntBASIC1.41□□□□□ -2.18
PDX1P52945 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
PDX1P52945 SNORD68-201ENST00000363214 84 ntBASIC1.4□□□□□ -2.19
PDX1P52945 RNU6-53P-201ENST00000365367 106 ntBASIC1.4□□□□□ -2.19
PDX1P52945 RNU6-326P-201ENST00000365480 107 ntBASIC1.4□□□□□ -2.19
PDX1P52945 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
PDX1P52945 RNU6-662P-201ENST00000384253 104 ntBASIC1.4□□□□□ -2.19
PDX1P52945 RNU6-472P-201ENST00000384299 107 ntBASIC1.4□□□□□ -2.19
PDX1P52945 RNU6-1105P-201ENST00000384774 107 ntBASIC1.4□□□□□ -2.19
PDX1P52945 SNORA53-201ENST00000391141 249 ntBASIC1.4□□□□□ -2.19
PDX1P52945 RPS27P16-201ENST00000425758 201 ntBASIC1.4□□□□□ -2.19
PDX1P52945 AC093850.1-201ENST00000454121 251 ntBASIC1.4□□□□□ -2.19
PDX1P52945 TRBVB-201ENST00000477100 408 ntBASIC1.4□□□□□ -2.19
PDX1P52945 AC092991.1-201ENST00000477176 376 ntBASIC1.4□□□□□ -2.19
PDX1P52945 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
PDX1P52945 SERF1AP1-201ENST00000514575 187 ntBASIC1.4□□□□□ -2.19
PDX1P52945 AL157834.3-201ENST00000615543 103 ntBASIC1.4□□□□□ -2.19
PDX1P52945 MIR8062-201ENST00000621515 85 ntBASIC1.4□□□□□ -2.19
PDX1P52945 AC106754.2-201ENST00000623006 233 ntBASIC1.4□□□□□ -2.19
PDX1P52945 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms