Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 RNA5SP481-201ENST00000516814 122 ntBASIC2.37□□□□□ -2.03
NEK4P51957 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.37□□□□□ -2.03
NEK4P51957 AC008555.8-201ENST00000623602 2168 ntBASIC2.37□□□□□ -2.03
NEK4P51957 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NEK4P51957 MIR126-201ENST00000362291 85 ntBASIC2.36□□□□□ -2.03
NEK4P51957 Y_RNA.75-201ENST00000362927 97 ntBASIC2.36□□□□□ -2.03
NEK4P51957 Y_RNA.240-201ENST00000364469 95 ntBASIC2.36□□□□□ -2.03
NEK4P51957 Y_RNA.265-201ENST00000364677 108 ntBASIC2.36□□□□□ -2.03
NEK4P51957 RNU6-578P-201ENST00000390980 103 ntBASIC2.36□□□□□ -2.03
NEK4P51957 RNA5SP212-201ENST00000391223 107 ntBASIC2.36□□□□□ -2.03
NEK4P51957 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.36□□□□□ -2.03
NEK4P51957 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
NEK4P51957 SNRPGP10-201ENST00000432323 225 ntBASIC2.36□□□□□ -2.03
NEK4P51957 AC079804.2-201ENST00000490376 200 ntBASIC2.36□□□□□ -2.03
NEK4P51957 Y_RNA.797-201ENST00000515977 94 ntBASIC2.36□□□□□ -2.03
NEK4P51957 RNU6-1219P-201ENST00000516143 112 ntBASIC2.36□□□□□ -2.03
NEK4P51957 RNU6-1007P-201ENST00000516586 107 ntBASIC2.36□□□□□ -2.03
NEK4P51957 MIR3935-201ENST00000583472 104 ntBASIC2.36□□□□□ -2.03
NEK4P51957 MIR4762-201ENST00000585261 75 ntBASIC2.36□□□□□ -2.03
NEK4P51957 SNORA28-201ENST00000606769 126 ntBASIC2.36□□□□□ -2.03
NEK4P51957 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEK4P51957 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
NEK4P51957 MIR449A-201ENST00000362113 91 ntBASIC2.35□□□□□ -2.03
NEK4P51957 Y_RNA.150-201ENST00000363562 102 ntBASIC2.35□□□□□ -2.03
NEK4P51957 Y_RNA.182-201ENST00000363880 111 ntBASIC2.35□□□□□ -2.03
NEK4P51957 Y_RNA.270-201ENST00000364693 104 ntBASIC2.35□□□□□ -2.03
NEK4P51957 RNU6-886P-201ENST00000384319 105 ntBASIC2.35□□□□□ -2.03
NEK4P51957 MIR522-201ENST00000385071 87 ntBASIC2.35□□□□□ -2.03
NEK4P51957 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NEK4P51957 SNORA12.1-201ENST00000390873 148 ntBASIC2.35□□□□□ -2.03
NEK4P51957 AL606845.1-201ENST00000404881 255 ntBASIC2.35□□□□□ -2.03
NEK4P51957 RNA5SP508-201ENST00000411327 119 ntBASIC2.35□□□□□ -2.03
NEK4P51957 AC009310.1-201ENST00000414414 451 ntBASIC2.35□□□□□ -2.03
NEK4P51957 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.35□□□□□ -2.03
NEK4P51957 NDUFA4P2-201ENST00000489989 244 ntBASIC2.35□□□□□ -2.03
NEK4P51957 OR9P1P-201ENST00000496431 281 ntBASIC2.35□□□□□ -2.03
NEK4P51957 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.35□□□□□ -2.03
NEK4P51957 SNORA31.17-201ENST00000516953 127 ntBASIC2.35□□□□□ -2.03
NEK4P51957 IGLV3-17-201ENST00000519099 244 ntBASIC2.35□□□□□ -2.03
NEK4P51957 MRPS18CP4-201ENST00000535821 231 ntBASIC2.35□□□□□ -2.03
NEK4P51957 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.35□□□□□ -2.03
NEK4P51957 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.35□□□□□ -2.03
NEK4P51957 AC108706.1-201ENST00000611053 297 ntBASIC2.35□□□□□ -2.03
NEK4P51957 uc_338.4-201ENST00000616635 176 ntBASIC2.35□□□□□ -2.03
NEK4P51957 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NEK4P51957 U8.5-201ENST00000364528 136 ntBASIC2.34□□□□□ -2.03
NEK4P51957 RNU6-275P-201ENST00000364910 107 ntBASIC2.34□□□□□ -2.03
NEK4P51957 Y_RNA.412-201ENST00000384001 104 ntBASIC2.34□□□□□ -2.03
NEK4P51957 Y_RNA.587-201ENST00000391210 103 ntBASIC2.34□□□□□ -2.03
NEK4P51957 PCNPP3-201ENST00000393579 471 ntBASIC2.34□□□□□ -2.03
NEK4P51957 FTH1P12-201ENST00000432137 551 ntBASIC2.34□□□□□ -2.03
NEK4P51957 STAG3L5P-204ENST00000443759 179 ntBASIC2.34□□□□□ -2.03
NEK4P51957 AC023449.1-201ENST00000454464 154 ntBASIC2.34□□□□□ -2.03
NEK4P51957 AC121758.2-201ENST00000553271 193 ntBASIC2.34□□□□□ -2.03
NEK4P51957 AL049861.1-201ENST00000603130 150 ntBASIC2.34□□□□□ -2.03
NEK4P51957 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.03
NEK4P51957 MIR219B-201ENST00000637023 88 ntBASIC2.34□□□□□ -2.03
NEK4P51957 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
NEK4P51957 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.33□□□□□ -2.04
NEK4P51957 RNU6-1031P-201ENST00000384773 107 ntBASIC2.33□□□□□ -2.04
NEK4P51957 AL034345.1-201ENST00000407768 123 ntBASIC2.33□□□□□ -2.04
NEK4P51957 RN7SKP51-201ENST00000410781 304 ntBASIC2.33□□□□□ -2.04
NEK4P51957 Z98742.3-201ENST00000418637 326 ntBASIC2.33□□□□□ -2.04
NEK4P51957 AL445646.1-201ENST00000431784 216 ntBASIC2.33□□□□□ -2.04
NEK4P51957 Y_RNA.662-201ENST00000516028 97 ntBASIC2.33□□□□□ -2.04
NEK4P51957 RNA5SP364-201ENST00000516938 78 ntBASIC2.33□□□□□ -2.04
NEK4P51957 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.33□□□□□ -2.04
NEK4P51957 AC109810.1-201ENST00000534066 224 ntBASIC2.33□□□□□ -2.04
NEK4P51957 MIR1273D-201ENST00000577266 86 ntBASIC2.33□□□□□ -2.04
NEK4P51957 AL773524.1-201ENST00000614065 229 ntBASIC2.33□□□□□ -2.04
NEK4P51957 SNORD68-201ENST00000363214 84 ntBASIC2.32□□□□□ -2.04
NEK4P51957 RNU6-312P-201ENST00000364629 107 ntBASIC2.32□□□□□ -2.04
NEK4P51957 RNU4-52P-201ENST00000384209 138 ntBASIC2.32□□□□□ -2.04
NEK4P51957 SUMO2P12-201ENST00000405924 140 ntBASIC2.32□□□□□ -2.04
NEK4P51957 MLLT10P1-201ENST00000418346 262 ntBASIC2.32□□□□□ -2.04
NEK4P51957 snoU13.27-201ENST00000459278 104 ntBASIC2.32□□□□□ -2.04
NEK4P51957 RNA5SP57-201ENST00000459463 123 ntBASIC2.32□□□□□ -2.04
NEK4P51957 AC008413.1-201ENST00000511864 177 ntBASIC2.32□□□□□ -2.04
NEK4P51957 SNORD77.4-201ENST00000516158 81 ntBASIC2.32□□□□□ -2.04
NEK4P51957 Y_RNA.714-201ENST00000517065 90 ntBASIC2.32□□□□□ -2.04
NEK4P51957 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.32□□□□□ -2.04
NEK4P51957 AC091544.4-201ENST00000555268 342 ntBASIC2.32□□□□□ -2.04
NEK4P51957 AC087685.1-201ENST00000587507 141 ntBASIC2.32□□□□□ -2.04
NEK4P51957 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
NEK4P51957 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
NEK4P51957 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.32□□□□□ -2.04
NEK4P51957 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NEK4P51957 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
NEK4P51957 Y_RNA.23-201ENST00000362496 106 ntBASIC2.31□□□□□ -2.04
NEK4P51957 Y_RNA.180-201ENST00000363867 113 ntBASIC2.31□□□□□ -2.04
NEK4P51957 RNU6-360P-201ENST00000390944 104 ntBASIC2.31□□□□□ -2.04
NEK4P51957 RNU6-131P-201ENST00000391144 107 ntBASIC2.31□□□□□ -2.04
NEK4P51957 RNU2-55P-201ENST00000411146 174 ntBASIC2.31□□□□□ -2.04
NEK4P51957 SNRPGP8-201ENST00000454064 226 ntBASIC2.31□□□□□ -2.04
NEK4P51957 RNU6-561P-201ENST00000516222 102 ntBASIC2.31□□□□□ -2.04
NEK4P51957 MIR4709-201ENST00000577272 72 ntBASIC2.31□□□□□ -2.04
NEK4P51957 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.31□□□□□ -2.04
NEK4P51957 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NEK4P51957 RNU6-1138P-201ENST00000365359 106 ntBASIC2.3□□□□□ -2.04
NEK4P51957 RNU6-209P-201ENST00000384118 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms