Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF144AP50876 RNU6-1125P-201ENST00000363601 107 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 SNORA25.6-201ENST00000364121 118 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 RNU6-787P-201ENST00000384032 107 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 RNU6-163P-201ENST00000384396 106 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 RNU6-160P-201ENST00000384591 107 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 RNU1-101P-201ENST00000391171 127 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 RNU4-69P-201ENST00000410677 143 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RNF144AP50876 Y_RNA.659-201ENST00000515994 113 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 SNORA31.4-201ENST00000516049 129 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 RNU6-65P-201ENST00000516332 98 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 MIR5588-201ENST00000581890 63 ntBASIC3.23□□□□□ -1.89
RNF144AP50876 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF144AP50876 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF144AP50876 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF144AP50876 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RNF144AP50876 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RNF144AP50876 RNU6-979P-201ENST00000383896 107 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 RNU6-1072P-201ENST00000384703 107 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 RNU6-443P-201ENST00000384780 107 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 RNU6-679P-201ENST00000391003 106 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
RNF144AP50876 POLR2J4-204ENST00000418424 324 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 RNU7-113P-201ENST00000459273 62 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 AC018868.1-201ENST00000491307 315 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 AC110768.1-201ENST00000509222 400 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 RN7SKP18-201ENST00000516005 275 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 Y_RNA.705-201ENST00000516862 110 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 AC026333.2-201ENST00000542164 106 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 MIR3158-1-201ENST00000583596 81 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 AC073346.2-201ENST00000624724 2058 ntBASIC3.22□□□□□ -1.89
RNF144AP50876 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF144AP50876 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
RNF144AP50876 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF144AP50876 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
RNF144AP50876 Y_RNA.95-201ENST00000363079 95 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 SNORD115-35-201ENST00000365122 82 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 Y_RNA.437-201ENST00000384113 113 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 RNU6-424P-201ENST00000384367 105 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 Y_RNA.494-201ENST00000384432 111 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 MIR200C-201ENST00000384980 68 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RNF144AP50876 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RNF144AP50876 RNU6-279P-201ENST00000391297 101 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 AL353813.1-201ENST00000440700 253 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 AL606517.2-201ENST00000442855 241 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 RN7SL504P-201ENST00000494496 287 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 SNORA67.7-201ENST00000516664 135 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 RNU6-267P-201ENST00000516714 103 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 RNU6-1116P-201ENST00000517269 99 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 AC090821.2-201ENST00000523552 176 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 AC007536.1-201ENST00000533382 349 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 AC022149.2-201ENST00000621061 203 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNF144AP50876 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNF144AP50876 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF144AP50876 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNF144AP50876 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNF144AP50876 AC092881.1-201ENST00000638218 2733 ntBASIC3.21□□□□□ -1.9
RNF144AP50876 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF144AP50876 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.2□□□□□ -1.9
RNF144AP50876 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-34-201ENST00000362441 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-12-201ENST00000362583 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 RNU4-35P-201ENST00000362588 141 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-29-201ENST00000362834 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-9-201ENST00000362912 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-21-201ENST00000362963 81 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-14-201ENST00000363090 81 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-13-201ENST00000363358 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-41-201ENST00000363608 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-11-201ENST00000363616 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-5-201ENST00000363633 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-39-201ENST00000363694 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-4-201ENST00000363810 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-16-201ENST00000363887 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-6-201ENST00000363942 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-42-201ENST00000364273 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-15-201ENST00000364809 81 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-1-201ENST00000364961 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-26-201ENST00000365067 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-10-201ENST00000365073 81 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 Y_RNA.313-201ENST00000365095 103 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-43-201ENST00000365503 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORA25B-201ENST00000365507 128 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD115-36-201ENST00000365629 82 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 SNORD77B-201ENST00000391112 67 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 RNU6-887P-201ENST00000410660 100 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 RN7SL442P-201ENST00000473804 320 ntBASIC3.2□□□□□ -1.9
RNF144AP50876 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RNF144AP50876 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RNF144AP50876 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF144AP50876 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNF144AP50876 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RNF144AP50876 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF144AP50876 Y_RNA.171-201ENST00000363760 102 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 Y_RNA.377-201ENST00000365644 108 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 RNU6-1296P-201ENST00000383879 107 ntBASIC3.19□□□□□ -1.9
RNF144AP50876 Y_RNA.467-201ENST00000384297 102 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms