Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RNU2-56P-201ENST00000516826 190 ntBASIC2.05□□□□□ -2.08
CPT1AP50416 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.05□□□□□ -2.08
CPT1AP50416 AP002004.2-201ENST00000531656 154 ntBASIC2.05□□□□□ -2.08
CPT1AP50416 AL929325.1-201ENST00000603096 117 ntBASIC2.05□□□□□ -2.08
CPT1AP50416 AC009779.6-201ENST00000603972 165 ntBASIC2.05□□□□□ -2.08
CPT1AP50416 AC011921.3-201ENST00000605540 361 ntBASIC2.05□□□□□ -2.08
CPT1AP50416 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CPT1AP50416 SNORA1B-201ENST00000362535 133 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 Y_RNA.257-201ENST00000364596 102 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 Y_RNA.304-201ENST00000365011 112 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 RNY4P28-201ENST00000365281 93 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 RNU6-1080P-201ENST00000383982 107 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 SNORA17.3-201ENST00000391159 129 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 RNU6-437P-201ENST00000459408 95 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.04□□□□□ -2.08
CPT1AP50416 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.04□□□□□ -2.08
CPT1AP50416 RNU6-250P-201ENST00000516958 103 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 AL358944.1-201ENST00000528537 144 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 MIR8054-201ENST00000620877 86 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 AL365265.1-201ENST00000621045 234 ntBASIC2.04□□□□□ -2.08
CPT1AP50416 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.04□□□□□ -2.08
CPT1AP50416 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 Y_RNA.4-201ENST00000362333 112 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 SNORA4.2-201ENST00000365313 147 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 RNU6-1318P-201ENST00000365389 103 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 RNU6-440P-201ENST00000390882 105 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 RNA5SP212-201ENST00000391223 107 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 MIR1298-201ENST00000408783 112 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.03□□□□□ -2.08
CPT1AP50416 RPS29P11-201ENST00000496507 171 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 SNORA31.17-201ENST00000516953 127 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.03□□□□□ -2.08
CPT1AP50416 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.03□□□□□ -2.08
CPT1AP50416 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPT1AP50416 Y_RNA.200-201ENST00000364018 102 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 RNU4-10P-201ENST00000364383 140 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 Y_RNA.238-201ENST00000364441 102 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 Y_RNA.262-201ENST00000364641 102 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 RNU6-950P-201ENST00000384651 107 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 Y_RNA.626-201ENST00000411288 95 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.02□□□□□ -2.09
CPT1AP50416 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.02□□□□□ -2.09
CPT1AP50416 AL049830.1-201ENST00000468034 425 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 COX6CP14-201ENST00000469580 174 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 RNU6-1053P-201ENST00000515930 101 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 SNORA31.10-201ENST00000516482 106 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 RNA5SP481-201ENST00000516814 122 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 AC100767.1-201ENST00000528178 123 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 AC130289.1-201ENST00000577321 73 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.02□□□□□ -2.09
CPT1AP50416 AL773524.1-201ENST00000614065 229 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 Y_RNA.802-201ENST00000614892 130 ntBASIC2.02□□□□□ -2.09
CPT1AP50416 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CPT1AP50416 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CPT1AP50416 MIR378A-201ENST00000362177 66 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 MIR367-201ENST00000362299 68 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 RNU6-674P-201ENST00000363831 107 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 RNU6-457P-201ENST00000363999 107 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 Y_RNA.199-201ENST00000364014 102 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 Y_RNA.203-201ENST00000364106 102 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 SNORA8.3-201ENST00000384679 139 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 AC009310.1-201ENST00000414414 451 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 HSPE1P9-201ENST00000440046 311 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 MIR4255-201ENST00000579351 72 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 MIR4724-201ENST00000579485 89 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 snoU13.31-201ENST00000607291 104 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 MIR8081-201ENST00000611533 95 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 WWP1P1-201ENST00000466609 2769 ntBASIC2.01□□□□□ -2.09
CPT1AP50416 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CPT1AP50416 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CPT1AP50416 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2□□□□□ -2.09
CPT1AP50416 Y_RNA.83-201ENST00000363005 113 ntBASIC2□□□□□ -2.09
CPT1AP50416 RNU6-653P-201ENST00000363074 106 ntBASIC2□□□□□ -2.09
CPT1AP50416 Y_RNA.265-201ENST00000364677 108 ntBASIC2□□□□□ -2.09
CPT1AP50416 MIR526A2-201ENST00000390198 65 ntBASIC2□□□□□ -2.09
CPT1AP50416 SNORA67.5-201ENST00000391036 107 ntBASIC2□□□□□ -2.09
CPT1AP50416 RN7SKP200-201ENST00000410564 320 ntBASIC2□□□□□ -2.09
CPT1AP50416 RNU6-383P-201ENST00000410864 94 ntBASIC2□□□□□ -2.09
CPT1AP50416 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2□□□□□ -2.09
CPT1AP50416 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
CPT1AP50416 RPL23AP6-201ENST00000446637 472 ntBASIC2□□□□□ -2.09
CPT1AP50416 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
CPT1AP50416 MIR502-201ENST00000606349 86 ntBASIC2□□□□□ -2.09
CPT1AP50416 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CPT1AP50416 Y_RNA.164-201ENST00000363709 102 ntBASIC1.99□□□□□ -2.09
CPT1AP50416 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
CPT1AP50416 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
CPT1AP50416 COX6CP10-201ENST00000416832 224 ntBASIC1.99□□□□□ -2.09
CPT1AP50416 STAG3L5P-204ENST00000443759 179 ntBASIC1.99□□□□□ -2.09
CPT1AP50416 snoU13.27-201ENST00000459278 104 ntBASIC1.99□□□□□ -2.09
CPT1AP50416 RNY3P16-201ENST00000516338 101 ntBASIC1.99□□□□□ -2.09
CPT1AP50416 RNU6-794P-201ENST00000517261 64 ntBASIC1.99□□□□□ -2.09
CPT1AP50416 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.99□□□□□ -2.09
CPT1AP50416 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CPT1AP50416 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CPT1AP50416 MIR411-201ENST00000362239 96 ntBASIC1.98□□□□□ -2.09
CPT1AP50416 Y_RNA.24-201ENST00000362508 103 ntBASIC1.98□□□□□ -2.09
CPT1AP50416 RNU4-41P-201ENST00000364426 143 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms