Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 RNY1P10-201ENST00000363268 113 ntBASIC1.23□□□□□ -2.21
LIG4P49917 RNU6-450P-201ENST00000364654 107 ntBASIC1.23□□□□□ -2.21
LIG4P49917 Y_RNA.336-201ENST00000365307 109 ntBASIC1.23□□□□□ -2.21
LIG4P49917 SNORA63.7-201ENST00000365579 123 ntBASIC1.23□□□□□ -2.21
LIG4P49917 Y_RNA.394-201ENST00000383942 103 ntBASIC1.23□□□□□ -2.21
LIG4P49917 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
LIG4P49917 MIR1298-201ENST00000408783 112 ntBASIC1.23□□□□□ -2.21
LIG4P49917 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.23□□□□□ -2.21
LIG4P49917 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
LIG4P49917 SNRPGP10-201ENST00000432323 225 ntBASIC1.23□□□□□ -2.21
LIG4P49917 Y_RNA.631-201ENST00000459607 101 ntBASIC1.23□□□□□ -2.21
LIG4P49917 SNORA31.4-201ENST00000516049 129 ntBASIC1.23□□□□□ -2.21
LIG4P49917 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
LIG4P49917 RNU6-397P-201ENST00000516226 104 ntBASIC1.23□□□□□ -2.21
LIG4P49917 RNU7-40P-201ENST00000516397 64 ntBASIC1.23□□□□□ -2.21
LIG4P49917 Y_RNA.715-201ENST00000517082 110 ntBASIC1.23□□□□□ -2.21
LIG4P49917 AC024405.2-202ENST00000532731 184 ntBASIC1.23□□□□□ -2.21
LIG4P49917 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.23□□□□□ -2.21
LIG4P49917 AC104695.3-201ENST00000604052 296 ntBASIC1.23□□□□□ -2.21
LIG4P49917 BX284668.6-201ENST00000606899 438 ntBASIC1.23□□□□□ -2.21
LIG4P49917 RNU4-80P-201ENST00000363200 141 ntBASIC1.22□□□□□ -2.21
LIG4P49917 Y_RNA.535-201ENST00000384612 99 ntBASIC1.22□□□□□ -2.21
LIG4P49917 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
LIG4P49917 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
LIG4P49917 RNU6-823P-201ENST00000391042 103 ntBASIC1.22□□□□□ -2.21
LIG4P49917 RNU6-131P-201ENST00000391144 107 ntBASIC1.22□□□□□ -2.21
LIG4P49917 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.22□□□□□ -2.21
LIG4P49917 AC245047.7-201ENST00000440265 293 ntBASIC1.22□□□□□ -2.21
LIG4P49917 LINC01399-202ENST00000458450 244 ntBASIC1.22□□□□□ -2.21
LIG4P49917 AC117454.1-201ENST00000491120 168 ntBASIC1.22□□□□□ -2.21
LIG4P49917 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.22□□□□□ -2.21
LIG4P49917 SNORD45.4-201ENST00000516629 73 ntBASIC1.22□□□□□ -2.21
LIG4P49917 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
LIG4P49917 AC127455.1-201ENST00000565496 145 ntBASIC1.22□□□□□ -2.21
LIG4P49917 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.22□□□□□ -2.21
LIG4P49917 MIR376A1-201ENST00000616574 68 ntBASIC1.22□□□□□ -2.21
LIG4P49917 AC027335.2-201ENST00000624030 375 ntBASIC1.22□□□□□ -2.21
LIG4P49917 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
LIG4P49917 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
LIG4P49917 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
LIG4P49917 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
LIG4P49917 SNORD113-8-201ENST00000363497 74 ntBASIC1.21□□□□□ -2.22
LIG4P49917 U8.7-201ENST00000364940 136 ntBASIC1.21□□□□□ -2.22
LIG4P49917 snoU2-30.1-201ENST00000365012 70 ntBASIC1.21□□□□□ -2.22
LIG4P49917 RNU6-910P-201ENST00000390844 107 ntBASIC1.21□□□□□ -2.22
LIG4P49917 RNU6-101P-201ENST00000410323 104 ntBASIC1.21□□□□□ -2.22
LIG4P49917 RPL23AP54-201ENST00000495129 419 ntBASIC1.21□□□□□ -2.22
LIG4P49917 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.21□□□□□ -2.22
LIG4P49917 SNORD111.1-201ENST00000516421 86 ntBASIC1.21□□□□□ -2.22
LIG4P49917 RNU7-115P-201ENST00000516433 55 ntBASIC1.21□□□□□ -2.22
LIG4P49917 RNU6-988P-201ENST00000519081 107 ntBASIC1.21□□□□□ -2.22
LIG4P49917 MIR4300-201ENST00000581016 96 ntBASIC1.21□□□□□ -2.22
LIG4P49917 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
LIG4P49917 RAC1P9-201ENST00000604990 392 ntBASIC1.21□□□□□ -2.22
LIG4P49917 MIR548AY-201ENST00000617669 107 ntBASIC1.21□□□□□ -2.22
LIG4P49917 MIR337-201ENST00000362281 93 ntBASIC1.2□□□□□ -2.22
LIG4P49917 Y_RNA.128-201ENST00000363391 112 ntBASIC1.2□□□□□ -2.22
LIG4P49917 Y_RNA.183-201ENST00000363882 113 ntBASIC1.2□□□□□ -2.22
LIG4P49917 Y_RNA.203-201ENST00000364106 102 ntBASIC1.2□□□□□ -2.22
LIG4P49917 SNORD50B-201ENST00000364995 70 ntBASIC1.2□□□□□ -2.22
LIG4P49917 Y_RNA.389-201ENST00000383924 113 ntBASIC1.2□□□□□ -2.22
LIG4P49917 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
LIG4P49917 MIR516B2-201ENST00000385190 85 ntBASIC1.2□□□□□ -2.22
LIG4P49917 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.2□□□□□ -2.22
LIG4P49917 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
LIG4P49917 Y_RNA.714-201ENST00000517065 90 ntBASIC1.2□□□□□ -2.22
LIG4P49917 RNA5SP404-201ENST00000517118 132 ntBASIC1.2□□□□□ -2.22
LIG4P49917 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.2□□□□□ -2.22
LIG4P49917 Y_RNA.222-201ENST00000364264 102 ntBASIC1.19□□□□□ -2.22
LIG4P49917 AC117470.1-201ENST00000381974 330 ntBASIC1.19□□□□□ -2.22
LIG4P49917 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
LIG4P49917 MIR1252-201ENST00000408861 65 ntBASIC1.19□□□□□ -2.22
LIG4P49917 Y_RNA.602-201ENST00000410535 92 ntBASIC1.19□□□□□ -2.22
LIG4P49917 HMGN2P32-201ENST00000444648 269 ntBASIC1.19□□□□□ -2.22
LIG4P49917 COX6CP14-201ENST00000469580 174 ntBASIC1.19□□□□□ -2.22
LIG4P49917 RNU6-897P-201ENST00000517135 105 ntBASIC1.19□□□□□ -2.22
LIG4P49917 Y_RNA.721-201ENST00000517207 102 ntBASIC1.19□□□□□ -2.22
LIG4P49917 MIR4781-201ENST00000585250 76 ntBASIC1.19□□□□□ -2.22
LIG4P49917 AL096861.1-201ENST00000610899 123 ntBASIC1.19□□□□□ -2.22
LIG4P49917 AC134503.1-201ENST00000633048 54 ntBASIC1.19□□□□□ -2.22
LIG4P49917 Y_RNA.138-201ENST00000363462 102 ntBASIC1.18□□□□□ -2.22
LIG4P49917 RNU6-1048P-201ENST00000364054 107 ntBASIC1.18□□□□□ -2.22
LIG4P49917 RNU6-102P-201ENST00000384485 104 ntBASIC1.18□□□□□ -2.22
LIG4P49917 MIR136-201ENST00000385207 82 ntBASIC1.18□□□□□ -2.22
LIG4P49917 SNORD115-46-201ENST00000390982 71 ntBASIC1.18□□□□□ -2.22
LIG4P49917 RNU6-1248P-201ENST00000391096 64 ntBASIC1.18□□□□□ -2.22
LIG4P49917 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.18□□□□□ -2.22
LIG4P49917 Y_RNA.604-201ENST00000410574 102 ntBASIC1.18□□□□□ -2.22
LIG4P49917 SNORD116-28-201ENST00000516123 91 ntBASIC1.18□□□□□ -2.22
LIG4P49917 AC090142.3-201ENST00000519012 385 ntBASIC1.18□□□□□ -2.22
LIG4P49917 AC136628.3-201ENST00000521868 290 ntBASIC1.18□□□□□ -2.22
LIG4P49917 JPX_2.1-201ENST00000614161 69 ntBASIC1.18□□□□□ -2.22
LIG4P49917 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
LIG4P49917 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
LIG4P49917 Y_RNA.4-201ENST00000362333 112 ntBASIC1.17□□□□□ -2.22
LIG4P49917 SNORA22B-201ENST00000383876 138 ntBASIC1.17□□□□□ -2.22
LIG4P49917 Y_RNA.418-201ENST00000384029 102 ntBASIC1.17□□□□□ -2.22
LIG4P49917 SNORA72.4-201ENST00000384174 132 ntBASIC1.17□□□□□ -2.22
LIG4P49917 MTCO2P12-201ENST00000427426 682 ntBASIC1.17□□□□□ -2.22
LIG4P49917 RNU7-141P-201ENST00000459304 62 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms