Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC011476.5-201ENST00000615594 130 ntBASIC0.63□□□□□ -2.31
CASP4P49662 AC138305.3-201ENST00000624988 240 ntBASIC0.63□□□□□ -2.31
CASP4P49662 AL442644.1-201ENST00000454390 3105 ntBASIC0.63□□□□□ -2.31
CASP4P49662 RNU6-490P-201ENST00000362985 107 ntBASIC0.62□□□□□ -2.31
CASP4P49662 SNORA25.3-201ENST00000363205 127 ntBASIC0.62□□□□□ -2.31
CASP4P49662 RNU6-1323P-201ENST00000384025 107 ntBASIC0.62□□□□□ -2.31
CASP4P49662 RNU6-1297P-201ENST00000384415 104 ntBASIC0.62□□□□□ -2.31
CASP4P49662 MIR605-201ENST00000385078 83 ntBASIC0.62□□□□□ -2.31
CASP4P49662 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
CASP4P49662 AL035398.1-201ENST00000430869 322 ntBASIC0.62□□□□□ -2.31
CASP4P49662 SNRPGP10-201ENST00000432323 225 ntBASIC0.62□□□□□ -2.31
CASP4P49662 SNORD123-201ENST00000459473 70 ntBASIC0.62□□□□□ -2.31
CASP4P49662 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
CASP4P49662 RNU6-966P-201ENST00000516479 104 ntBASIC0.62□□□□□ -2.31
CASP4P49662 RNU11-2P-201ENST00000516898 142 ntBASIC0.62□□□□□ -2.31
CASP4P49662 RNU7-116P-201ENST00000516940 62 ntBASIC0.62□□□□□ -2.31
CASP4P49662 AC109810.1-201ENST00000534066 224 ntBASIC0.62□□□□□ -2.31
CASP4P49662 AL136317.1-201ENST00000612653 226 ntBASIC0.62□□□□□ -2.31
CASP4P49662 U6.92-201ENST00000636464 89 ntBASIC0.62□□□□□ -2.31
CASP4P49662 SNORD50B-201ENST00000364995 70 ntBASIC0.61□□□□□ -2.31
CASP4P49662 Y_RNA.329-201ENST00000365209 107 ntBASIC0.61□□□□□ -2.31
CASP4P49662 Y_RNA.570-201ENST00000384750 101 ntBASIC0.61□□□□□ -2.31
CASP4P49662 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
CASP4P49662 RNU6-855P-201ENST00000410395 104 ntBASIC0.61□□□□□ -2.31
CASP4P49662 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
CASP4P49662 AL390729.2-201ENST00000416137 156 ntBASIC0.61□□□□□ -2.31
CASP4P49662 AC005042.3-201ENST00000453230 174 ntBASIC0.61□□□□□ -2.31
CASP4P49662 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
CASP4P49662 AC023827.1-201ENST00000569247 97 ntBASIC0.61□□□□□ -2.31
CASP4P49662 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.61□□□□□ -2.31
CASP4P49662 AC087685.1-201ENST00000587507 141 ntBASIC0.61□□□□□ -2.31
CASP4P49662 VN1R91P-201ENST00000594377 169 ntBASIC0.61□□□□□ -2.31
CASP4P49662 AC007742.2-201ENST00000618226 398 ntBASIC0.61□□□□□ -2.31
CASP4P49662 RNU6-1175P-201ENST00000365200 107 ntBASIC0.6□□□□□ -2.31
CASP4P49662 MIR559-201ENST00000385188 96 ntBASIC0.6□□□□□ -2.31
CASP4P49662 RNU6-1304P-201ENST00000411374 106 ntBASIC0.6□□□□□ -2.31
CASP4P49662 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
CASP4P49662 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
CASP4P49662 RNA5SP436-201ENST00000516020 115 ntBASIC0.6□□□□□ -2.31
CASP4P49662 RNU6-1110P-201ENST00000516462 101 ntBASIC0.6□□□□□ -2.31
CASP4P49662 SNORD14E-201ENST00000364009 85 ntBASIC0.59□□□□□ -2.31
CASP4P49662 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
CASP4P49662 AC098614.3-201ENST00000438957 440 ntBASIC0.59□□□□□ -2.31
CASP4P49662 MIR4423-201ENST00000580922 80 ntBASIC0.59□□□□□ -2.31
CASP4P49662 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.59□□□□□ -2.31
CASP4P49662 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CASP4P49662 Y_RNA.259-201ENST00000364619 101 ntBASIC0.58□□□□□ -2.32
CASP4P49662 Y_RNA.341-201ENST00000365341 102 ntBASIC0.58□□□□□ -2.32
CASP4P49662 Y_RNA.368-201ENST00000365547 113 ntBASIC0.58□□□□□ -2.32
CASP4P49662 Y_RNA.370-201ENST00000365589 108 ntBASIC0.58□□□□□ -2.32
CASP4P49662 RNU6-708P-201ENST00000384217 107 ntBASIC0.58□□□□□ -2.32
CASP4P49662 Y_RNA.456-201ENST00000384232 111 ntBASIC0.58□□□□□ -2.32
CASP4P49662 SNORD89-201ENST00000390981 114 ntBASIC0.58□□□□□ -2.32
CASP4P49662 SNORD111-201ENST00000408139 94 ntBASIC0.58□□□□□ -2.32
CASP4P49662 AC024067.1-201ENST00000426199 223 ntBASIC0.58□□□□□ -2.32
CASP4P49662 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.58□□□□□ -2.32
CASP4P49662 RNU6-1223P-201ENST00000517124 104 ntBASIC0.58□□□□□ -2.32
CASP4P49662 AC093027.1-201ENST00000546698 429 ntBASIC0.58□□□□□ -2.32
CASP4P49662 AL512605.2-201ENST00000592972 256 ntBASIC0.58□□□□□ -2.32
CASP4P49662 AC010205.1-201ENST00000616668 449 ntBASIC0.58□□□□□ -2.32
CASP4P49662 AC008133.2-201ENST00000624540 351 ntBASIC0.58□□□□□ -2.32
CASP4P49662 MIR4251-201ENST00000635819 61 ntBASIC0.58□□□□□ -2.32
CASP4P49662 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CASP4P49662 AC134026.1-201ENST00000623249 2239 ntBASIC0.57□□□□□ -2.32
CASP4P49662 Y_RNA.203-201ENST00000364106 102 ntBASIC0.57□□□□□ -2.32
CASP4P49662 Y_RNA.310-201ENST00000365063 113 ntBASIC0.57□□□□□ -2.32
CASP4P49662 Y_RNA.387-201ENST00000383918 102 ntBASIC0.57□□□□□ -2.32
CASP4P49662 RNU6-1040P-201ENST00000383974 107 ntBASIC0.57□□□□□ -2.32
CASP4P49662 SNORD38C-201ENST00000384381 69 ntBASIC0.57□□□□□ -2.32
CASP4P49662 Y_RNA.505-201ENST00000384489 102 ntBASIC0.57□□□□□ -2.32
CASP4P49662 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.57□□□□□ -2.32
CASP4P49662 RNU6-994P-201ENST00000410507 111 ntBASIC0.57□□□□□ -2.32
CASP4P49662 Y_RNA.619-201ENST00000410951 90 ntBASIC0.57□□□□□ -2.32
CASP4P49662 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.57□□□□□ -2.32
CASP4P49662 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.57□□□□□ -2.32
CASP4P49662 AL392103.1-201ENST00000447000 198 ntBASIC0.57□□□□□ -2.32
CASP4P49662 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
CASP4P49662 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.57□□□□□ -2.32
CASP4P49662 RNU6-699P-201ENST00000517081 110 ntBASIC0.57□□□□□ -2.32
CASP4P49662 AC006600.1-201ENST00000572529 153 ntBASIC0.57□□□□□ -2.32
CASP4P49662 SNORA4-201ENST00000584302 138 ntBASIC0.57□□□□□ -2.32
CASP4P49662 POLR3GP1-201ENST00000594073 261 ntBASIC0.57□□□□□ -2.32
CASP4P49662 AL078603.1-201ENST00000603824 313 ntBASIC0.57□□□□□ -2.32
CASP4P49662 AP003357.1-201ENST00000604497 148 ntBASIC0.57□□□□□ -2.32
CASP4P49662 JPX_2.1-201ENST00000614161 69 ntBASIC0.57□□□□□ -2.32
CASP4P49662 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
CASP4P49662 7SK.10-201ENST00000621414 298 ntBASIC0.57□□□□□ -2.32
CASP4P49662 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
CASP4P49662 RNU6-1335P-201ENST00000365426 107 ntBASIC0.56□□□□□ -2.32
CASP4P49662 Y_RNA.462-201ENST00000384268 102 ntBASIC0.56□□□□□ -2.32
CASP4P49662 RNY1P14-201ENST00000384426 108 ntBASIC0.56□□□□□ -2.32
CASP4P49662 RNU6-1067P-201ENST00000384752 107 ntBASIC0.56□□□□□ -2.32
CASP4P49662 RNY4P36-201ENST00000391116 96 ntBASIC0.56□□□□□ -2.32
CASP4P49662 AC096644.2-201ENST00000429278 159 ntBASIC0.56□□□□□ -2.32
CASP4P49662 AC098869.1-201ENST00000481627 292 ntBASIC0.56□□□□□ -2.32
CASP4P49662 SNORA20.3-201ENST00000516880 132 ntBASIC0.56□□□□□ -2.32
CASP4P49662 AC036111.3-201ENST00000526389 112 ntBASIC0.56□□□□□ -2.32
CASP4P49662 AL355073.2-201ENST00000612106 557 ntBASIC0.56□□□□□ -2.32
CASP4P49662 RMST_2.1-201ENST00000617263 136 ntBASIC0.56□□□□□ -2.32
CASP4P49662 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms