Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 Y_RNA.8-201ENST00000362353 102 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 SNORD114-1-201ENST00000362705 72 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 Y_RNA.272-201ENST00000364696 102 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 RNU6-746P-201ENST00000384112 109 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 Y_RNA.506-201ENST00000384494 102 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 SNORA8-201ENST00000384574 139 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 MIR515-2-201ENST00000384883 83 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 MIR515-1-201ENST00000384884 83 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 AL606845.1-201ENST00000404881 255 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
NPTX2P47972 AL021397.1-201ENST00000451806 248 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.21□□□□□ -2.06
NPTX2P47972 MTND5P41-201ENST00000517498 206 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 AC024995.1-201ENST00000523014 93 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.21□□□□□ -2.06
NPTX2P47972 MIR5089-201ENST00000580047 84 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 AL627230.6-201ENST00000611129 280 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 AC018630.2-201ENST00000534866 2403 ntBASIC2.21□□□□□ -2.06
NPTX2P47972 RNU4-84P-201ENST00000364200 139 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 Y_RNA.398-201ENST00000383952 99 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 RNU6-125P-201ENST00000384505 107 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 RNU6-1228P-201ENST00000391014 107 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 RNA5SP212-201ENST00000391223 107 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 RNA5SP496-201ENST00000391240 109 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 UBL5P3-201ENST00000475112 231 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 AC005840.1-201ENST00000498412 377 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 RNU6-561P-201ENST00000516222 102 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 RNU6-1291P-201ENST00000516591 104 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 MIR3133-201ENST00000583157 78 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 AC005786.1-201ENST00000588553 154 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 AL773524.1-201ENST00000614065 229 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.2□□□□□ -2.06
NPTX2P47972 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
NPTX2P47972 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NPTX2P47972 RNU6-1080P-201ENST00000383982 107 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 MIR597-201ENST00000384968 97 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 RNU11-5P-201ENST00000391216 129 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 RPL23AP6-201ENST00000446637 472 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 AC233266.1-201ENST00000454518 96 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 snoU13.15-201ENST00000459407 104 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 AL163195.1-201ENST00000496941 348 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 Y_RNA.703-201ENST00000516846 111 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 RNU6-341P-201ENST00000516973 96 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 MIR4299-201ENST00000577899 72 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 MIR4431-201ENST00000579990 94 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 AC242852.1-201ENST00000612151 96 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 AC244015.1-201ENST00000622301 99 ntBASIC2.19□□□□□ -2.06
NPTX2P47972 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
NPTX2P47972 ZNF355P-201ENST00000427301 3216 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 RNU6-1209P-201ENST00000363655 107 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 Y_RNA.796-201ENST00000364268 102 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 Y_RNA.267-201ENST00000364679 109 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 Y_RNA.799-201ENST00000364992 102 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 RNU6-1130P-201ENST00000365434 107 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 Y_RNA.357-201ENST00000365487 109 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 RNY3P5-201ENST00000384127 102 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 Y_RNA.621-201ENST00000411065 96 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 AL121914.1-201ENST00000450188 156 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 MRPS17P9-201ENST00000511924 393 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 RNU7-200P-201ENST00000516105 62 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 RPL23AP91-201ENST00000569211 455 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 MIR2681-201ENST00000581814 105 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 AL096840.1-201ENST00000603287 93 ntBASIC2.18□□□□□ -2.06
NPTX2P47972 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.18□□□□□ -2.06
NPTX2P47972 RNU6-728P-201ENST00000365375 104 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 RNY1P5-201ENST00000383890 115 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 SNORD116-18-201ENST00000383961 92 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 RNU6-187P-201ENST00000384139 106 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 MIR15B-201ENST00000385045 98 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 Y_RNA.580-201ENST00000391004 95 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 Y_RNA.587-201ENST00000391210 103 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 RNU4-61P-201ENST00000411243 107 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 AC244636.1-201ENST00000421152 228 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.17□□□□□ -2.06
NPTX2P47972 SNORD11-201ENST00000459124 84 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.17□□□□□ -2.06
NPTX2P47972 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 AL049861.1-201ENST00000603130 150 ntBASIC2.17□□□□□ -2.06
NPTX2P47972 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NPTX2P47972 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NPTX2P47972 RNU6-239P-201ENST00000390990 99 ntBASIC2.16□□□□□ -2.06
NPTX2P47972 Y_RNA.622-201ENST00000411091 108 ntBASIC2.16□□□□□ -2.06
NPTX2P47972 HMGN2P38-201ENST00000423806 265 ntBASIC2.16□□□□□ -2.06
NPTX2P47972 AL606517.2-201ENST00000442855 241 ntBASIC2.16□□□□□ -2.06
NPTX2P47972 RNU6-717P-201ENST00000459076 104 ntBASIC2.16□□□□□ -2.06
NPTX2P47972 RNU7-94P-201ENST00000459576 63 ntBASIC2.16□□□□□ -2.06
NPTX2P47972 RNU6-346P-201ENST00000516288 111 ntBASIC2.16□□□□□ -2.06
NPTX2P47972 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.16□□□□□ -2.06
NPTX2P47972 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.16□□□□□ -2.06
NPTX2P47972 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
NPTX2P47972 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NPTX2P47972 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
NPTX2P47972 SNORA1B-201ENST00000362535 133 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms