Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
NKX2-1P43699 MIR302D-201ENST00000362275 68 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 RNU6-662P-201ENST00000384253 104 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 Y_RNA.489-201ENST00000384410 101 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 MIR1278-201ENST00000408753 81 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.44□□□□□ -2.18
NKX2-1P43699 Y_RNA.638-201ENST00000459374 113 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 RNU7-34P-201ENST00000459394 64 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 RNU6-437P-201ENST00000459408 95 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 AC099513.1-201ENST00000490423 301 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 AC117454.1-201ENST00000491120 168 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 RNU4-71P-201ENST00000516258 113 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 AC015688.6-201ENST00000577737 104 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.44□□□□□ -2.18
NKX2-1P43699 AL929325.1-201ENST00000603096 117 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 AC027279.3-201ENST00000625055 122 ntBASIC1.44□□□□□ -2.18
NKX2-1P43699 ICE2P2-201ENST00000483823 2787 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 AC134026.1-201ENST00000623249 2239 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 MIRLET7C-201ENST00000362160 84 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 Y_RNA.203-201ENST00000364106 102 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 Y_RNA.242-201ENST00000364473 110 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 Y_RNA.307-201ENST00000365022 117 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 RNY4P28-201ENST00000365281 93 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 SNORA70B-201ENST00000384210 135 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 RNU2-2P-201ENST00000410396 191 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 HMGN1P7-201ENST00000491722 313 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 Y_RNA.680-201ENST00000516441 93 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 MIR4285-201ENST00000581001 85 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 MIR3128-201ENST00000581957 66 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 AL021707.8-201ENST00000609428 183 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 AC021506.2-201ENST00000612354 169 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 AL442067.1-201ENST00000613261 223 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 AC141273.2-201ENST00000618989 130 ntBASIC1.43□□□□□ -2.18
NKX2-1P43699 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
NKX2-1P43699 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.43□□□□□ -2.18
NKX2-1P43699 Y_RNA.188-201ENST00000363952 111 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 Y_RNA.796-201ENST00000364268 102 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 RNU4-41P-201ENST00000364426 143 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 Y_RNA.799-201ENST00000364992 102 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 RNA5SP126-201ENST00000365092 109 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 RNU6-203P-201ENST00000384038 104 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 RNU6-136P-201ENST00000384663 107 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 MIR626-201ENST00000385032 94 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 RN7SKP101-201ENST00000411376 320 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 HSPE1P24-201ENST00000450782 238 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 RNU2-56P-201ENST00000516826 190 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 AC005357.1-201ENST00000588399 301 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 AC006006.1-201ENST00000603082 144 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 AC095038.3-201ENST00000634439 195 ntBASIC1.42□□□□□ -2.18
NKX2-1P43699 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NKX2-1P43699 Y_RNA.76-201ENST00000362931 109 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 RNU6-1205P-201ENST00000363625 106 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 RNU6-1048P-201ENST00000364054 107 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 Y_RNA.267-201ENST00000364679 109 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 Y_RNA.277-201ENST00000364754 102 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 SNORA20.1-201ENST00000364790 130 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 RNU6-424P-201ENST00000384367 105 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 MIR522-201ENST00000385071 87 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 Y_RNA.590-201ENST00000410140 107 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
NKX2-1P43699 BTF3P11-201ENST00000426582 477 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 AC005908.1-201ENST00000468701 347 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 RPL23AP54-201ENST00000495129 419 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 RNA5SP445-201ENST00000515889 115 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 RNA5SP182-201ENST00000516064 82 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 RNU6-1007P-201ENST00000516586 107 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 RNU6-1291P-201ENST00000516591 104 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 Y_RNA.714-201ENST00000517065 90 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.41□□□□□ -2.18
NKX2-1P43699 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.41□□□□□ -2.18
NKX2-1P43699 AC068700.1-201ENST00000565862 3754 ntBASIC1.41□□□□□ -2.18
NKX2-1P43699 MIR126-201ENST00000362291 85 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 RNU6-653P-201ENST00000363074 106 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 Y_RNA.117-201ENST00000363294 101 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 RNU6-833P-201ENST00000363486 107 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 Y_RNA.253-201ENST00000364562 112 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 Y_RNA.292-201ENST00000364904 97 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 SNORD1A-201ENST00000364968 72 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 RNY3P5-201ENST00000384127 102 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 MTCO2P33-201ENST00000402100 465 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 RNU6-651P-201ENST00000411040 105 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 AC079140.2-201ENST00000506193 142 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 AC100767.1-201ENST00000528178 123 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 AC009779.6-201ENST00000603972 165 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 Y_RNA.802-201ENST00000614892 130 ntBASIC1.4□□□□□ -2.19
NKX2-1P43699 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.4□□□□□ -2.19
NKX2-1P43699 RNU6-379P-201ENST00000363813 104 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 Y_RNA.265-201ENST00000364677 108 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 RNU6-1080P-201ENST00000383982 107 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 SNORA8.3-201ENST00000384679 139 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 RNU2-55P-201ENST00000411146 174 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 AC027119.1-201ENST00000440877 241 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.39□□□□□ -2.19
NKX2-1P43699 AC233266.1-201ENST00000454518 96 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 SNORD11-201ENST00000459124 84 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 Y_RNA.673-201ENST00000516306 88 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 RNU6-126P-201ENST00000516685 103 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 RNU6-902P-201ENST00000517212 91 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms