Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHRNA4P43681 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CHRNA4P43681 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CHRNA4P43681 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.19□□□□□ -1.9
CHRNA4P43681 RN7SKP200-201ENST00000410564 320 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 RNA5SP120-201ENST00000410900 112 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 AL022718.1-201ENST00000412004 84 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 AL512326.2-201ENST00000426359 151 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 RNU7-23P-201ENST00000459465 62 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 AP002884.2-201ENST00000471647 395 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 SNORA18.7-201ENST00000516910 131 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 AP003484.1-201ENST00000530974 250 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 ELOCP29-201ENST00000588193 334 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 AC096720.1-201ENST00000604441 183 ntBASIC3.19□□□□□ -1.9
CHRNA4P43681 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 Y_RNA.299-201ENST00000364973 94 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 RNU6-438P-201ENST00000365561 103 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 RNU6-442P-201ENST00000383968 104 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHRNA4P43681 SNRPGP14-201ENST00000435400 219 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRNA4P43681 RN7SL863P-201ENST00000462370 296 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRNA4P43681 U2.20-201ENST00000613956 192 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRNA4P43681 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.18□□□□□ -1.9
CHRNA4P43681 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CHRNA4P43681 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA4P43681 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA4P43681 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA4P43681 RNU6-1274P-201ENST00000384557 107 ntBASIC3.17□□□□□ -1.9
CHRNA4P43681 AL627390.1-201ENST00000396055 340 ntBASIC3.17□□□□□ -1.9
CHRNA4P43681 AC097463.2-201ENST00000421074 142 ntBASIC3.17□□□□□ -1.9
CHRNA4P43681 TRIAP1P1-201ENST00000427062 225 ntBASIC3.17□□□□□ -1.9
CHRNA4P43681 RPS15AP28-201ENST00000435088 386 ntBASIC3.17□□□□□ -1.9
CHRNA4P43681 AC087499.4-201ENST00000448505 178 ntBASIC3.17□□□□□ -1.9
CHRNA4P43681 RNU6-341P-201ENST00000516973 96 ntBASIC3.17□□□□□ -1.9
CHRNA4P43681 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.17□□□□□ -1.9
CHRNA4P43681 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.17□□□□□ -1.9
CHRNA4P43681 MIR5680-201ENST00000577577 84 ntBASIC3.17□□□□□ -1.9
CHRNA4P43681 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.17□□□□□ -1.9
CHRNA4P43681 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
CHRNA4P43681 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHRNA4P43681 GABRG2-229ENST00000641017 3628 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.16□□□□□ -1.9
CHRNA4P43681 RNU6-1313P-201ENST00000362622 102 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 RNU6-268P-201ENST00000364174 107 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHRNA4P43681 MIR1253-201ENST00000408273 105 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 RPL30P14-201ENST00000482744 348 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 RNU7-99P-201ENST00000516271 62 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 RNU7-128P-201ENST00000517247 62 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 U7.4-201ENST00000614961 63 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 MIR3651-201ENST00000630427 90 ntBASIC3.16□□□□□ -1.9
CHRNA4P43681 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.9
CHRNA4P43681 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.15□□□□□ -1.9
CHRNA4P43681 AC091564.4-201ENST00000533934 2194 ntBASIC3.15□□□□□ -1.9
CHRNA4P43681 SNORD14E-201ENST00000364009 85 ntBASIC3.15□□□□□ -1.91
CHRNA4P43681 SNORA1.1-201ENST00000364671 133 ntBASIC3.15□□□□□ -1.91
CHRNA4P43681 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CHRNA4P43681 AL035398.1-201ENST00000430869 322 ntBASIC3.15□□□□□ -1.91
CHRNA4P43681 BX510359.1-201ENST00000456973 237 ntBASIC3.15□□□□□ -1.91
CHRNA4P43681 AC004223.1-201ENST00000479840 271 ntBASIC3.15□□□□□ -1.91
CHRNA4P43681 RNU6-711P-201ENST00000517255 106 ntBASIC3.15□□□□□ -1.91
CHRNA4P43681 MIR6079-201ENST00000635807 62 ntBASIC3.15□□□□□ -1.91
CHRNA4P43681 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHRNA4P43681 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.15□□□□□ -1.91
CHRNA4P43681 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CHRNA4P43681 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHRNA4P43681 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.14□□□□□ -1.91
CHRNA4P43681 SNORA7.4-201ENST00000384249 137 ntBASIC3.14□□□□□ -1.91
CHRNA4P43681 Y_RNA.500-201ENST00000384466 111 ntBASIC3.14□□□□□ -1.91
CHRNA4P43681 SNORD67-201ENST00000390833 111 ntBASIC3.14□□□□□ -1.91
CHRNA4P43681 RNU6-1186P-201ENST00000410429 97 ntBASIC3.14□□□□□ -1.91
CHRNA4P43681 AC009414.1-201ENST00000427200 443 ntBASIC3.14□□□□□ -1.91
CHRNA4P43681 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.14□□□□□ -1.91
CHRNA4P43681 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.14□□□□□ -1.91
CHRNA4P43681 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.14□□□□□ -1.91
CHRNA4P43681 PHBP14-201ENST00000512887 367 ntBASIC3.14□□□□□ -1.91
CHRNA4P43681 RNU6-856P-201ENST00000516959 98 ntBASIC3.14□□□□□ -1.91
CHRNA4P43681 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.14□□□□□ -1.91
CHRNA4P43681 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
CHRNA4P43681 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CHRNA4P43681 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHRNA4P43681 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
CHRNA4P43681 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CHRNA4P43681 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CHRNA4P43681 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHRNA4P43681 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CHRNA4P43681 SNORD115-27-201ENST00000364430 82 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 Y_RNA.267-201ENST00000364679 109 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 RNU6-805P-201ENST00000365643 106 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 RNU6-198P-201ENST00000384258 104 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 RNA5SP293-201ENST00000410527 113 ntBASIC3.13□□□□□ -1.91
CHRNA4P43681 Y_RNA.609-201ENST00000410669 89 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms