Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-136P-201ENST00000384663 107 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 RNU6-1248P-201ENST00000391096 64 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 RNU6-855P-201ENST00000410395 104 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 AC024067.1-201ENST00000426199 223 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 AL731563.1-201ENST00000442202 214 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 AP003072.1-201ENST00000531740 145 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 AC127455.1-201ENST00000565496 145 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGCLP35914 MIR3145-201ENST00000580727 82 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 AL591926.4-201ENST00000616895 298 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.14□□□□□ -2.23
HMGCLP35914 RNU4-80P-201ENST00000363200 141 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 U8.7-201ENST00000364940 136 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 RNU6-806P-201ENST00000365147 105 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 RNU6-290P-201ENST00000365212 101 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 RNU6-326P-201ENST00000365480 107 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 RNU6-1080P-201ENST00000383982 107 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 SNORA72.4-201ENST00000384174 132 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 Y_RNA.541-201ENST00000384640 113 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 MIR522-201ENST00000385071 87 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 MIR548F4-201ENST00000408515 105 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 MTCO1P5-201ENST00000433573 344 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 POLR2KP2-201ENST00000438155 177 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.13□□□□□ -2.23
HMGCLP35914 SUMO2P16-201ENST00000519475 264 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGCLP35914 AL442663.2-201ENST00000554385 511 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 MIR3664-201ENST00000579074 99 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 AL513534.2-201ENST00000603836 250 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 AL365434.2-201ENST00000607979 234 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 SNORD3E-202ENST00000627253 216 ntBASIC1.13□□□□□ -2.23
HMGCLP35914 Y_RNA.19-201ENST00000362462 99 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 Y_RNA.152-201ENST00000363578 100 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 RNU6-694P-201ENST00000364071 147 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 Y_RNA.210-201ENST00000364161 110 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 SNORA63C-201ENST00000364578 129 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 RNU6-392P-201ENST00000364926 101 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 RNU6-1160P-201ENST00000384546 104 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 RNU6-1109P-201ENST00000391187 107 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 RNU2-14P-201ENST00000411053 191 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 RPL21P38-201ENST00000418090 167 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGCLP35914 AC092991.1-201ENST00000477176 376 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 RPL30P7-201ENST00000479312 323 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 AC098869.1-201ENST00000481627 292 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 CYCTP-201ENST00000504253 315 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 AC108729.3-201ENST00000513484 108 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 AC024405.2-202ENST00000532731 184 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 AL512310.8-201ENST00000550183 120 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 AC090049.2-201ENST00000550377 109 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 Y_RNA.812-201ENST00000610788 101 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 Y_RNA.784-201ENST00000613803 101 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 Y_RNA.787-201ENST00000616522 101 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 Y_RNA.780-201ENST00000617336 101 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 Y_RNA.801-201ENST00000619005 101 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 MIR8063-201ENST00000621930 81 ntBASIC1.12□□□□□ -2.23
HMGCLP35914 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
HMGCLP35914 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMGCLP35914 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.11□□□□□ -2.23
HMGCLP35914 RNU6-199P-201ENST00000362954 107 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 Y_RNA.569-201ENST00000384749 103 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 RNU6-1105P-201ENST00000384774 107 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 MIR215-201ENST00000384858 110 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 SNORD41-201ENST00000386967 70 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 SNORA26.5-201ENST00000391215 123 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 SNX2P2-201ENST00000424553 323 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 MTND4LP30-201ENST00000454092 297 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 AC233266.1-201ENST00000454518 96 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 HMGN1P7-201ENST00000491722 313 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 MRPS35P2-201ENST00000508242 191 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 RNU6-917P-201ENST00000516294 104 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 RNU6-165P-201ENST00000517170 99 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 AP003733.2-201ENST00000529409 171 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 MIR4719-201ENST00000585233 84 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 POLR3GP1-201ENST00000594073 261 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 AC242852.1-201ENST00000612151 96 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 MIR548AY-201ENST00000617669 107 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 AC244015.1-201ENST00000622301 99 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 AC022140.2-201ENST00000623500 188 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 AC068647.2-201ENST00000637380 353 ntBASIC1.11□□□□□ -2.23
HMGCLP35914 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
HMGCLP35914 UBE2WP1-201ENST00000362030 340 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 Y_RNA.84-201ENST00000363011 104 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 Y_RNA.217-201ENST00000364214 105 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 RNU6-53P-201ENST00000365367 106 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 SNORA2.2-201ENST00000365473 135 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 RNU6-1065P-201ENST00000384513 106 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 AC113618.1-201ENST00000416747 285 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 RNU7-141P-201ENST00000459304 62 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 Y_RNA.641-201ENST00000459414 105 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 Y_RNA.637-201ENST00000459424 114 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 SNORA40.15-201ENST00000516884 107 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGCLP35914 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HMGCLP35914 AC120024.3-201ENST00000603167 156 ntBASIC1.1□□□□□ -2.23
HMGCLP35914 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
HMGCLP35914 Y_RNA.64-201ENST00000362845 102 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 Y_RNA.203-201ENST00000364106 102 ntBASIC1.09□□□□□ -2.23
HMGCLP35914 Y_RNA.338-201ENST00000365320 114 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms