Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
HOXA11P31270 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
HOXA11P31270 Y_RNA.272-201ENST00000364696 102 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 SNORD113-1-201ENST00000365321 69 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 RNY3P5-201ENST00000384127 102 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 SNORA8-201ENST00000384574 139 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 RNU6-578P-201ENST00000390980 103 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 RNU11-3P-201ENST00000391111 133 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 SNORA36B-201ENST00000410438 131 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXA11P31270 SCARNA8-201ENST00000515924 131 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 RNU7-121P-201ENST00000516604 62 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 RNU6-789P-201ENST00000517105 102 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 MIR3683-201ENST00000580847 82 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 MIR3133-201ENST00000583157 78 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
HOXA11P31270 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXA11P31270 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HOXA11P31270 RNU4-10P-201ENST00000364383 140 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 Y_RNA.293-201ENST00000364908 93 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 RNU6-407P-201ENST00000365280 104 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 SNORA72-201ENST00000384339 132 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 RNU6-1228P-201ENST00000391014 107 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 RN7SKP101-201ENST00000411376 320 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA11P31270 AC117454.1-201ENST00000491120 168 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 RNU6-1278P-201ENST00000516130 107 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 RNU6-250P-201ENST00000516958 103 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 RNU7-128P-201ENST00000517247 62 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA11P31270 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA11P31270 MIR4724-201ENST00000579485 89 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 MIR4431-201ENST00000579990 94 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 MIR4438-201ENST00000585271 93 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 POLR3GP1-201ENST00000594073 261 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 AC068647.2-201ENST00000637380 353 ntBASIC1.97□□□□□ -2.09
HOXA11P31270 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXA11P31270 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
HOXA11P31270 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HOXA11P31270 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
HOXA11P31270 snoU2-30.2-201ENST00000362805 70 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 Y_RNA.229-201ENST00000364347 113 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 RNU6-969P-201ENST00000383900 105 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 RNU6-804P-201ENST00000384286 107 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 Y_RNA.572-201ENST00000384757 98 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 AL117342.1-201ENST00000404861 406 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 RNA5SP511-201ENST00000410487 115 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 RNU4-43P-201ENST00000410628 137 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 HMGN2P34-201ENST00000437647 269 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 HSPE1P21-201ENST00000438283 308 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 AC011406.1-201ENST00000512440 370 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 RNU6-1146P-201ENST00000516282 102 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 MTND5P41-201ENST00000517498 206 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.96□□□□□ -2.1
HOXA11P31270 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.96□□□□□ -2.1
HOXA11P31270 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.96□□□□□ -2.1
HOXA11P31270 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.96□□□□□ -2.1
HOXA11P31270 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HOXA11P31270 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
HOXA11P31270 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HOXA11P31270 Y_RNA.24-201ENST00000362508 103 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 Y_RNA.182-201ENST00000363880 111 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 RNU6-743P-201ENST00000364151 106 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 RNU6-187P-201ENST00000384139 106 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 RNA5SP496-201ENST00000391240 109 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 AL627390.1-201ENST00000396055 340 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 MIR1262-201ENST00000408276 93 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 RNU6-437P-201ENST00000459408 95 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 RPS27P22-201ENST00000478056 241 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXA11P31270 AC109810.1-201ENST00000534066 224 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 MIR3910-1-201ENST00000580936 111 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 MIR338-201ENST00000636369 67 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 U6.108-201ENST00000637764 58 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.95□□□□□ -2.1
HOXA11P31270 RNU6-774P-201ENST00000363238 107 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 SNORA16.1-201ENST00000364597 132 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 Y_RNA.398-201ENST00000383952 99 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HOXA11P31270 RNU6-239P-201ENST00000390990 99 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 SNORA17.3-201ENST00000391159 129 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 MIR1283-2-201ENST00000408621 87 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 SEPT7P4-201ENST00000437076 306 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 Y_RNA.797-201ENST00000515977 94 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 RNU7-99P-201ENST00000516271 62 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 RNU6-63P-201ENST00000516690 95 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 RNU6-453P-201ENST00000516819 85 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 RNU7-172P-201ENST00000517125 64 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXA11P31270 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 MIR4713-201ENST00000582691 75 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 AC091178.2-201ENST00000584401 117 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 MTND1P7-201ENST00000632801 297 ntBASIC1.94□□□□□ -2.1
HOXA11P31270 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms