Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 RNU6-126P-201ENST00000516685 103 ntBASIC2.36□□□□□ -2.03
APEX1P27695 MIR548AI-201ENST00000579940 88 ntBASIC2.36□□□□□ -2.03
APEX1P27695 MIR4435-1-201ENST00000582552 80 ntBASIC2.36□□□□□ -2.03
APEX1P27695 AL137847.3-201ENST00000611521 109 ntBASIC2.36□□□□□ -2.03
APEX1P27695 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
APEX1P27695 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
APEX1P27695 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
APEX1P27695 RNU6-1019P-201ENST00000364424 107 ntBASIC2.35□□□□□ -2.03
APEX1P27695 RNA5SP21-201ENST00000410917 96 ntBASIC2.35□□□□□ -2.03
APEX1P27695 FTH1P12-201ENST00000432137 551 ntBASIC2.35□□□□□ -2.03
APEX1P27695 RNU6-1211P-201ENST00000459179 105 ntBASIC2.35□□□□□ -2.03
APEX1P27695 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.35□□□□□ -2.03
APEX1P27695 Y_RNA.714-201ENST00000517065 90 ntBASIC2.35□□□□□ -2.03
APEX1P27695 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
APEX1P27695 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
APEX1P27695 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
APEX1P27695 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
APEX1P27695 RNU6-859P-201ENST00000362728 107 ntBASIC2.34□□□□□ -2.03
APEX1P27695 Y_RNA.66-201ENST00000362862 102 ntBASIC2.34□□□□□ -2.03
APEX1P27695 RNU6-1081P-201ENST00000384537 107 ntBASIC2.34□□□□□ -2.03
APEX1P27695 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
APEX1P27695 Y_RNA.584-201ENST00000391090 114 ntBASIC2.34□□□□□ -2.03
APEX1P27695 HMGN2P39-201ENST00000398005 273 ntBASIC2.34□□□□□ -2.03
APEX1P27695 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.34□□□□□ -2.03
APEX1P27695 RNU6-62P-201ENST00000516526 102 ntBASIC2.34□□□□□ -2.03
APEX1P27695 RNA5SP402-201ENST00000517148 110 ntBASIC2.34□□□□□ -2.03
APEX1P27695 RNU1-104P-201ENST00000517280 175 ntBASIC2.34□□□□□ -2.03
APEX1P27695 AP001328.1-201ENST00000528550 176 ntBASIC2.34□□□□□ -2.03
APEX1P27695 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.03
APEX1P27695 MIR4635-201ENST00000583759 79 ntBASIC2.34□□□□□ -2.03
APEX1P27695 AL365222.1-201ENST00000614661 98 ntBASIC2.34□□□□□ -2.03
APEX1P27695 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.34□□□□□ -2.03
APEX1P27695 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APEX1P27695 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APEX1P27695 Y_RNA.265-201ENST00000364677 108 ntBASIC2.33□□□□□ -2.04
APEX1P27695 RNU6-915P-201ENST00000364943 103 ntBASIC2.33□□□□□ -2.04
APEX1P27695 RNA5SP126-201ENST00000365092 109 ntBASIC2.33□□□□□ -2.04
APEX1P27695 RNU2-52P-201ENST00000410680 190 ntBASIC2.33□□□□□ -2.04
APEX1P27695 RPS12P2-201ENST00000439728 269 ntBASIC2.33□□□□□ -2.04
APEX1P27695 AC108938.1-201ENST00000451204 136 ntBASIC2.33□□□□□ -2.04
APEX1P27695 RN7SL429P-201ENST00000479090 223 ntBASIC2.33□□□□□ -2.04
APEX1P27695 RN7SL489P-201ENST00000486185 223 ntBASIC2.33□□□□□ -2.04
APEX1P27695 RN7SL327P-201ENST00000488659 223 ntBASIC2.33□□□□□ -2.04
APEX1P27695 RNU6-504P-201ENST00000516568 104 ntBASIC2.33□□□□□ -2.04
APEX1P27695 AC007751.1-201ENST00000529260 376 ntBASIC2.33□□□□□ -2.04
APEX1P27695 MIR5092-201ENST00000583139 88 ntBASIC2.33□□□□□ -2.04
APEX1P27695 AC087685.1-201ENST00000587507 141 ntBASIC2.33□□□□□ -2.04
APEX1P27695 SNORD14A-201ENST00000606526 91 ntBASIC2.33□□□□□ -2.04
APEX1P27695 AC011603.4-201ENST00000611325 277 ntBASIC2.33□□□□□ -2.04
APEX1P27695 RN7SL853P-201ENST00000617250 223 ntBASIC2.33□□□□□ -2.04
APEX1P27695 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
APEX1P27695 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
APEX1P27695 AP006437.1-201ENST00000641440 3685 ntBASIC2.32□□□□□ -2.04
APEX1P27695 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
APEX1P27695 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.32□□□□□ -2.04
APEX1P27695 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
APEX1P27695 Y_RNA.218-201ENST00000364218 104 ntBASIC2.32□□□□□ -2.04
APEX1P27695 SNORD50B-201ENST00000364995 70 ntBASIC2.32□□□□□ -2.04
APEX1P27695 RNU6-440P-201ENST00000390882 105 ntBASIC2.32□□□□□ -2.04
APEX1P27695 RNU2-51P-201ENST00000410708 197 ntBASIC2.32□□□□□ -2.04
APEX1P27695 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.32□□□□□ -2.04
APEX1P27695 STAG3L5P-204ENST00000443759 179 ntBASIC2.32□□□□□ -2.04
APEX1P27695 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
APEX1P27695 Y_RNA.666-201ENST00000516187 112 ntBASIC2.32□□□□□ -2.04
APEX1P27695 RNVU1-2-201ENST00000516326 135 ntBASIC2.32□□□□□ -2.04
APEX1P27695 RNU6-1270P-201ENST00000517128 108 ntBASIC2.32□□□□□ -2.04
APEX1P27695 TUG1_4.1-201ENST00000619464 181 ntBASIC2.32□□□□□ -2.04
APEX1P27695 MIR8054-201ENST00000620877 86 ntBASIC2.32□□□□□ -2.04
APEX1P27695 AP001340.1-201ENST00000624405 217 ntBASIC2.32□□□□□ -2.04
APEX1P27695 RNU4-82P-201ENST00000362443 140 ntBASIC2.31□□□□□ -2.04
APEX1P27695 RNU6-1084P-201ENST00000362498 107 ntBASIC2.31□□□□□ -2.04
APEX1P27695 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
APEX1P27695 SNORD61-201ENST00000384252 73 ntBASIC2.31□□□□□ -2.04
APEX1P27695 MIR9-1-201ENST00000385198 89 ntBASIC2.31□□□□□ -2.04
APEX1P27695 MIR802-201ENST00000390235 94 ntBASIC2.31□□□□□ -2.04
APEX1P27695 RNU6-1154P-201ENST00000391001 104 ntBASIC2.31□□□□□ -2.04
APEX1P27695 RNA5SP465-201ENST00000391195 109 ntBASIC2.31□□□□□ -2.04
APEX1P27695 RNA5SP482-201ENST00000391269 118 ntBASIC2.31□□□□□ -2.04
APEX1P27695 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
APEX1P27695 RNU6-479P-201ENST00000516348 105 ntBASIC2.31□□□□□ -2.04
APEX1P27695 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.31□□□□□ -2.04
APEX1P27695 MIR4762-201ENST00000585261 75 ntBASIC2.31□□□□□ -2.04
APEX1P27695 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.31□□□□□ -2.04
APEX1P27695 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
APEX1P27695 U8.5-201ENST00000364528 136 ntBASIC2.3□□□□□ -2.04
APEX1P27695 MIR539-201ENST00000365690 78 ntBASIC2.3□□□□□ -2.04
APEX1P27695 SNORA1-201ENST00000384107 130 ntBASIC2.3□□□□□ -2.04
APEX1P27695 SNORA22C-201ENST00000384614 134 ntBASIC2.3□□□□□ -2.04
APEX1P27695 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.3□□□□□ -2.04
APEX1P27695 RNA5SP508-201ENST00000411327 119 ntBASIC2.3□□□□□ -2.04
APEX1P27695 RNU6-313P-201ENST00000516317 112 ntBASIC2.3□□□□□ -2.04
APEX1P27695 SNORA18.4-201ENST00000516440 124 ntBASIC2.3□□□□□ -2.04
APEX1P27695 SNORA31.10-201ENST00000516482 106 ntBASIC2.3□□□□□ -2.04
APEX1P27695 RNU6-1234P-201ENST00000516877 103 ntBASIC2.3□□□□□ -2.04
APEX1P27695 MIR3129-201ENST00000581095 76 ntBASIC2.3□□□□□ -2.04
APEX1P27695 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APEX1P27695 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
APEX1P27695 ICE2P2-201ENST00000483823 2787 ntBASIC2.29□□□□□ -2.04
APEX1P27695 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.29□□□□□ -2.04
APEX1P27695 U8.1-201ENST00000362843 134 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms