Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Y_RNA.314-201ENST00000365114 102 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 Y_RNA.329-201ENST00000365209 107 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 Y_RNA.355-201ENST00000365462 98 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 Y_RNA.368-201ENST00000365547 113 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 SNORD111-201ENST00000408139 94 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 RNU6-855P-201ENST00000410395 104 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 RNU6-710P-201ENST00000410424 105 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 RNU6-994P-201ENST00000410507 111 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 MTND1P2-201ENST00000430604 821 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 AC036111.3-201ENST00000526389 112 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 AC022441.3-201ENST00000605737 136 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 AL136317.1-201ENST00000612653 226 ntBASIC0.69□□□□□ -2.3
HLA-DPA1P20036 AC134026.1-201ENST00000623249 2239 ntBASIC0.68□□□□□ -2.3
HLA-DPA1P20036 RNU6-876P-201ENST00000391295 104 ntBASIC0.68□□□□□ -2.3
HLA-DPA1P20036 MCFD2P1-201ENST00000417812 300 ntBASIC0.68□□□□□ -2.3
HLA-DPA1P20036 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
HLA-DPA1P20036 AC117454.1-201ENST00000491120 168 ntBASIC0.68□□□□□ -2.3
HLA-DPA1P20036 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
HLA-DPA1P20036 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
HLA-DPA1P20036 SNORD14E-201ENST00000364009 85 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 Y_RNA.796-201ENST00000364268 102 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 Y_RNA.799-201ENST00000364992 102 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 SNORD81.2-201ENST00000365153 76 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.67□□□□□ -2.3
HLA-DPA1P20036 snoU13.18-201ENST00000459483 104 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.67□□□□□ -2.3
HLA-DPA1P20036 RN7SKP295-201ENST00000517264 153 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 AC008133.2-201ENST00000624540 351 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.67□□□□□ -2.3
HLA-DPA1P20036 MIR4251-201ENST00000635819 61 ntBASIC0.67□□□□□ -2.3
HLA-DPA1P20036 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
HLA-DPA1P20036 Y_RNA.148-201ENST00000363557 117 ntBASIC0.66□□□□□ -2.3
HLA-DPA1P20036 SNORD113.3-201ENST00000364630 78 ntBASIC0.66□□□□□ -2.3
HLA-DPA1P20036 Y_RNA.599-201ENST00000410489 109 ntBASIC0.66□□□□□ -2.3
HLA-DPA1P20036 MTCO3P10-201ENST00000455912 772 ntBASIC0.66□□□□□ -2.3
HLA-DPA1P20036 Y_RNA.653-201ENST00000459091 95 ntBASIC0.66□□□□□ -2.3
HLA-DPA1P20036 AC098869.1-201ENST00000481627 292 ntBASIC0.66□□□□□ -2.3
HLA-DPA1P20036 RNU6-911P-201ENST00000516523 104 ntBASIC0.66□□□□□ -2.3
HLA-DPA1P20036 RBM11P1-201ENST00000604951 799 ntBASIC0.66□□□□□ -2.3
HLA-DPA1P20036 AC007742.2-201ENST00000618226 398 ntBASIC0.66□□□□□ -2.3
HLA-DPA1P20036 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
HLA-DPA1P20036 Y_RNA.27-201ENST00000362540 103 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 Y_RNA.118-201ENST00000363300 101 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 RNU6-1175P-201ENST00000365200 107 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 Y_RNA.341-201ENST00000365341 102 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 RNU6-1323P-201ENST00000384025 107 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 SNORD38C-201ENST00000384381 69 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 MT-TL1-201ENST00000386347 75 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 AL392103.1-201ENST00000447000 198 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 RNU7-116P-201ENST00000516940 62 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 MIR548AR-201ENST00000582191 57 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 POLR3GP1-201ENST00000594073 261 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 AC133104.2-201ENST00000615272 193 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 AC022709.1-201ENST00000615967 87 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 U6.92-201ENST00000636464 89 ntBASIC0.65□□□□□ -2.31
HLA-DPA1P20036 RNU6-708P-201ENST00000384217 107 ntBASIC0.64□□□□□ -2.31
HLA-DPA1P20036 AC096644.2-201ENST00000429278 159 ntBASIC0.64□□□□□ -2.31
HLA-DPA1P20036 AC005534.2-201ENST00000431047 433 ntBASIC0.64□□□□□ -2.31
HLA-DPA1P20036 AC099799.1-201ENST00000439809 192 ntBASIC0.64□□□□□ -2.31
HLA-DPA1P20036 AC005042.3-201ENST00000453230 174 ntBASIC0.64□□□□□ -2.31
HLA-DPA1P20036 RNU6-559P-201ENST00000516151 98 ntBASIC0.64□□□□□ -2.31
HLA-DPA1P20036 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
HLA-DPA1P20036 MIR6516-201ENST00000630554 81 ntBASIC0.64□□□□□ -2.31
HLA-DPA1P20036 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HLA-DPA1P20036 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HLA-DPA1P20036 RNU6-490P-201ENST00000362985 107 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 RNU6-654P-201ENST00000364373 107 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 RNU6-1067P-201ENST00000384752 107 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 SNORD28B-201ENST00000390993 75 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 MIR1302-7-201ENST00000408841 72 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DPA1P20036 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DPA1P20036 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 AC113139.1-201ENST00000605049 239 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 JPX_2.1-201ENST00000614161 69 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 AC022306.2-201ENST00000617563 647 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 AC138305.3-201ENST00000624988 240 ntBASIC0.63□□□□□ -2.31
HLA-DPA1P20036 Y_RNA.203-201ENST00000364106 102 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 Y_RNA.310-201ENST00000365063 113 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HLA-DPA1P20036 SNORA2B-201ENST00000384583 137 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 Y_RNA.570-201ENST00000384750 101 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 MIR802-201ENST00000390235 94 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 RNU1-119P-201ENST00000391122 165 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 AC011195.1-201ENST00000578177 177 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 MIR4300-201ENST00000581016 96 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 AC005730.3-201ENST00000583067 366 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 AC025253.1-201ENST00000613623 543 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 U6atac.1-201ENST00000616025 117 ntBASIC0.62□□□□□ -2.31
HLA-DPA1P20036 Y_RNA.354-201ENST00000365448 111 ntBASIC0.61□□□□□ -2.31
HLA-DPA1P20036 RNU6-442P-201ENST00000383968 104 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms