Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MTND5P34-201ENST00000568888 325 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 CPDP1-201ENST00000579660 283 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 MIR6082-201ENST00000613604 109 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.29□□□□□ -2.62
HIST1H1DP16402 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.29□□□□□ -2.62
HIST1H1DP16402 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.3□□□□□ -2.62
HIST1H1DP16402 RNU6-108P-201ENST00000365558 107 ntBASIC-1.3□□□□□ -2.62
HIST1H1DP16402 RNU6-708P-201ENST00000384217 107 ntBASIC-1.3□□□□□ -2.62
HIST1H1DP16402 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.3□□□□□ -2.62
HIST1H1DP16402 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.3□□□□□ -2.62
HIST1H1DP16402 SNRPGP14-201ENST00000435400 219 ntBASIC-1.3□□□□□ -2.62
HIST1H1DP16402 AC021146.6-201ENST00000514659 117 ntBASIC-1.3□□□□□ -2.62
HIST1H1DP16402 IGKV1-22-201ENST00000524313 326 ntBASIC-1.3□□□□□ -2.62
HIST1H1DP16402 AC009248.2-201ENST00000619826 254 ntBASIC-1.3□□□□□ -2.62
HIST1H1DP16402 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.31□□□□□ -2.62
HIST1H1DP16402 RNU6-660P-201ENST00000364566 109 ntBASIC-1.31□□□□□ -2.62
HIST1H1DP16402 RNU6-535P-201ENST00000384722 107 ntBASIC-1.31□□□□□ -2.62
HIST1H1DP16402 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
HIST1H1DP16402 HSPE1P23-201ENST00000509838 286 ntBASIC-1.31□□□□□ -2.62
HIST1H1DP16402 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.31□□□□□ -2.62
HIST1H1DP16402 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.31□□□□□ -2.62
HIST1H1DP16402 SNORD114-25-201ENST00000363742 72 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 RNU6-455P-201ENST00000384681 107 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 RNU6-541P-201ENST00000384709 110 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 MIR204-201ENST00000385200 110 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 AC236972.2-201ENST00000434979 310 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 AL445193.1-201ENST00000441183 141 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 UQCRBP2-201ENST00000447827 297 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 MTCO3P38-201ENST00000468910 766 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 RPL30P10-201ENST00000488148 337 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 RNU6-276P-201ENST00000516114 96 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 AL137161.1-201ENST00000532231 390 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 UBL5P4-201ENST00000562584 236 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 AL133173.2-201ENST00000614270 90 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 AC072046.2-201ENST00000618366 268 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 Z97988.1-201ENST00000637697 135 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 AC073869.9-201ENST00000641610 120 ntBASIC-1.32□□□□□ -2.62
HIST1H1DP16402 RNU6-403P-201ENST00000363163 104 ntBASIC-1.33□□□□□ -2.62
HIST1H1DP16402 RNA5SP245-201ENST00000364239 121 ntBASIC-1.33□□□□□ -2.62
HIST1H1DP16402 RNU4-36P-201ENST00000364294 144 ntBASIC-1.33□□□□□ -2.62
HIST1H1DP16402 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.33□□□□□ -2.62
HIST1H1DP16402 MIR521-1-201ENST00000384902 87 ntBASIC-1.33□□□□□ -2.62
HIST1H1DP16402 RNU2-29P-201ENST00000410423 189 ntBASIC-1.33□□□□□ -2.62
HIST1H1DP16402 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.33□□□□□ -2.62
HIST1H1DP16402 Z82188.1-201ENST00000436709 154 ntBASIC-1.33□□□□□ -2.62
HIST1H1DP16402 SNORA27.4-201ENST00000516650 95 ntBASIC-1.33□□□□□ -2.62
HIST1H1DP16402 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.33□□□□□ -2.62
HIST1H1DP16402 MIR410-201ENST00000362222 80 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 RNU4-92P-201ENST00000363783 136 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 RNU6-442P-201ENST00000383968 104 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 RNA5SP25-201ENST00000410815 110 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 MTCO2P21-201ENST00000419780 677 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.34□□□□□ -2.62
HIST1H1DP16402 AL500527.2-201ENST00000454105 95 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 RNU2-11P-201ENST00000459191 187 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 SNORA25.13-201ENST00000516395 103 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 AC022878.1-201ENST00000530684 149 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 AP003072.1-201ENST00000531740 145 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 AL158063.1-201ENST00000615349 536 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 AC022960.3-201ENST00000619794 441 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 AP002371.2-201ENST00000624450 503 ntBASIC-1.34□□□□□ -2.62
HIST1H1DP16402 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 RNU6-926P-201ENST00000384075 107 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 SNORD12C-201ENST00000386307 89 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.35□□□□□ -2.63
HIST1H1DP16402 SNORD110-201ENST00000408189 75 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 RNA5SP118-201ENST00000410385 109 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 RNU6-325P-201ENST00000411132 105 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 MTCO2P8-201ENST00000412213 658 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 AC010655.3-201ENST00000478818 450 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 SCARNA17-201ENST00000516183 144 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 AC090616.2-202ENST00000584248 222 ntBASIC-1.35□□□□□ -2.63
HIST1H1DP16402 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 SNORD50.1-201ENST00000362987 71 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 HMGN1P33-201ENST00000432945 451 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 MTATP6P14-201ENST00000455189 673 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 AC131281.1-201ENST00000522984 164 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 AC104576.1-201ENST00000524225 88 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.36□□□□□ -2.63
HIST1H1DP16402 AC006566.1-201ENST00000608943 513 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 MIR8055-201ENST00000610739 97 ntBASIC-1.36□□□□□ -2.63
HIST1H1DP16402 RNU6-501P-201ENST00000364072 100 ntBASIC-1.37□□□□□ -2.63
HIST1H1DP16402 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.37□□□□□ -2.63
HIST1H1DP16402 MIR9-2-201ENST00000384838 87 ntBASIC-1.37□□□□□ -2.63
HIST1H1DP16402 MIR1-2-201ENST00000384961 85 ntBASIC-1.37□□□□□ -2.63
HIST1H1DP16402 RNU6-913P-201ENST00000390913 95 ntBASIC-1.37□□□□□ -2.63
HIST1H1DP16402 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.37□□□□□ -2.63
HIST1H1DP16402 AL590002.1-201ENST00000406554 418 ntBASIC-1.37□□□□□ -2.63
HIST1H1DP16402 MIR1265-201ENST00000408444 86 ntBASIC-1.37□□□□□ -2.63
HIST1H1DP16402 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms