Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 U8.7-201ENST00000364940 136 ntBASIC0.79□□□□□ -2.28
H2AFXP16104 Y_RNA.315-201ENST00000365117 102 ntBASIC0.79□□□□□ -2.28
H2AFXP16104 Y_RNA.368-201ENST00000365547 113 ntBASIC0.79□□□□□ -2.28
H2AFXP16104 RNU6-710P-201ENST00000410424 105 ntBASIC0.79□□□□□ -2.28
H2AFXP16104 RPL23AP54-201ENST00000495129 419 ntBASIC0.79□□□□□ -2.28
H2AFXP16104 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.79□□□□□ -2.28
H2AFXP16104 AC006157.1-201ENST00000611750 366 ntBASIC0.79□□□□□ -2.28
H2AFXP16104 AC010205.1-201ENST00000616668 449 ntBASIC0.79□□□□□ -2.28
H2AFXP16104 AL606534.2-204ENST00000635008 178 ntBASIC0.79□□□□□ -2.28
H2AFXP16104 Y_RNA.148-201ENST00000363557 117 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 RNU6-1048P-201ENST00000364054 107 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 Y_RNA.263-201ENST00000364659 114 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 RNU6-1323P-201ENST00000384025 107 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 MIR200A-201ENST00000384875 90 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 MIR605-201ENST00000385078 83 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 Y_RNA.579-201ENST00000390939 94 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 MIR1185-1-201ENST00000408598 86 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 MIR1278-201ENST00000408753 81 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 RPS3AP1-201ENST00000413190 320 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 AC236972.2-201ENST00000434979 310 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 SNORD123-201ENST00000459473 70 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 AC005840.1-201ENST00000498412 377 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.78□□□□□ -2.28
H2AFXP16104 MIR548S-201ENST00000581352 82 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 RBM11P1-201ENST00000604951 799 ntBASIC0.78□□□□□ -2.28
H2AFXP16104 Y_RNA.203-201ENST00000364106 102 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 Y_RNA.252-201ENST00000364556 101 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 RNY1P14-201ENST00000384426 108 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 POLR2J4-204ENST00000418424 324 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 MTND5P20-201ENST00000448677 143 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 RNU6-197P-201ENST00000516680 100 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 MIR4795-201ENST00000584182 89 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 AL121655.1-201ENST00000605811 308 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 snoU13.31-201ENST00000607291 104 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 Y_RNA.804-201ENST00000615262 101 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 AC007485.1-201ENST00000616755 206 ntBASIC0.77□□□□□ -2.29
H2AFXP16104 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
H2AFXP16104 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 SNORD14E-201ENST00000364009 85 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 Y_RNA.286-201ENST00000364813 102 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 Y_RNA.439-201ENST00000384119 94 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 Y_RNA.456-201ENST00000384232 111 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 Y_RNA.462-201ENST00000384268 102 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 Y_RNA.471-201ENST00000384312 102 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 Y_RNA.551-201ENST00000384661 102 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 RNU6-21P-201ENST00000384710 107 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 SNORD28B-201ENST00000390993 75 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 MTND5P15-201ENST00000434246 349 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 HMGN2P32-201ENST00000444648 269 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.76□□□□□ -2.29
H2AFXP16104 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.76□□□□□ -2.29
H2AFXP16104 RNU7-115P-201ENST00000516433 55 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 Y_RNA.702-201ENST00000516843 96 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 AP003357.1-201ENST00000604497 148 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 PART1_1.1-201ENST00000611761 217 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 MIR6857-201ENST00000613267 93 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 JPX_2.1-201ENST00000614161 69 ntBASIC0.76□□□□□ -2.29
H2AFXP16104 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.76□□□□□ -2.29
H2AFXP16104 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.75□□□□□ -2.29
H2AFXP16104 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
H2AFXP16104 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
H2AFXP16104 RNU6-1209P-201ENST00000363655 107 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 RNU6-1335P-201ENST00000365426 107 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 MIR570-201ENST00000384917 97 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 RNU2-14P-201ENST00000411053 191 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 RNU6-130P-201ENST00000411112 103 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.75□□□□□ -2.29
H2AFXP16104 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.75□□□□□ -2.29
H2AFXP16104 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 RNU6-976P-201ENST00000516086 111 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 SNORA40.14-201ENST00000516543 86 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 RNU7-116P-201ENST00000516940 62 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 Y_RNA.714-201ENST00000517065 90 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 AP003716.2-201ENST00000528260 108 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 AC131055.1-201ENST00000584626 316 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.75□□□□□ -2.29
H2AFXP16104 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 MIR548AY-201ENST00000617669 107 ntBASIC0.75□□□□□ -2.29
H2AFXP16104 AC134026.1-201ENST00000623249 2239 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 RNU4-73P-201ENST00000363164 141 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 RNU4-80P-201ENST00000363200 141 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 Y_RNA.796-201ENST00000364268 102 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 Y_RNA.799-201ENST00000364992 102 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 RNU1-115P-201ENST00000365329 160 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 RNU6-53P-201ENST00000365367 106 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 Y_RNA.383-201ENST00000383855 97 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 RNY3P14-201ENST00000384309 102 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 AC024067.1-201ENST00000426199 223 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 U8.20-201ENST00000459445 131 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 HMGN1P10-201ENST00000474557 553 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 NDUFA4P2-201ENST00000489989 244 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 RN7SKP164-201ENST00000516138 266 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 RNU6-1046P-201ENST00000516538 107 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 RNU7-43P-201ENST00000516554 64 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.74□□□□□ -2.29
H2AFXP16104 AC040926.1-201ENST00000530195 238 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 AC109810.1-201ENST00000534066 224 ntBASIC0.74□□□□□ -2.29
H2AFXP16104 AC127455.1-201ENST00000565496 145 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms