Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.38□□□□□ -2.79
VCANP13611 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.38□□□□□ -2.79
VCANP13611 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.38□□□□□ -2.79
VCANP13611 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.38□□□□□ -2.79
VCANP13611 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.38□□□□□ -2.79
VCANP13611 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.38□□□□□ -2.79
VCANP13611 RNU6-641P-201ENST00000384006 107 ntBASIC-2.38□□□□□ -2.79
VCANP13611 MIR891A-201ENST00000401237 79 ntBASIC-2.38□□□□□ -2.79
VCANP13611 AC078795.2-201ENST00000602835 1252 ntBASIC-2.38□□□□□ -2.79
VCANP13611 AL355598.1-201ENST00000604169 202 ntBASIC-2.38□□□□□ -2.79
VCANP13611 SNORA28-201ENST00000606769 126 ntBASIC-2.38□□□□□ -2.79
VCANP13611 RNU6-154P-201ENST00000384306 106 ntBASIC-2.39□□□□□ -2.79
VCANP13611 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-2.39□□□□□ -2.79
VCANP13611 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.39□□□□□ -2.79
VCANP13611 RNU5E-6P-201ENST00000365574 115 ntBASIC-2.39□□□□□ -2.79
VCANP13611 RNU6-1310P-201ENST00000384153 107 ntBASIC-2.39□□□□□ -2.79
VCANP13611 SNORD65.1-201ENST00000390889 71 ntBASIC-2.39□□□□□ -2.79
VCANP13611 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-2.39□□□□□ -2.79
VCANP13611 COX7BP2-201ENST00000437976 242 ntBASIC-2.39□□□□□ -2.79
VCANP13611 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-2.39□□□□□ -2.79
VCANP13611 EIF1AXP2-201ENST00000555940 413 ntBASIC-2.39□□□□□ -2.79
VCANP13611 AL359881.1-201ENST00000602916 267 ntBASIC-2.39□□□□□ -2.79
VCANP13611 RNU2-54P-201ENST00000410299 190 ntBASIC-2.4□□□□□ -2.79
VCANP13611 AL512637.2-201ENST00000431287 1256 ntBASIC-2.4□□□□□ -2.79
VCANP13611 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.4□□□□□ -2.79
VCANP13611 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.4□□□□□ -2.79
VCANP13611 RNU6-592P-201ENST00000411333 103 ntBASIC-2.4□□□□□ -2.79
VCANP13611 AC104850.1-201ENST00000435940 476 ntBASIC-2.4□□□□□ -2.79
VCANP13611 SNORD115-21-201ENST00000362963 81 ntBASIC-2.4□□□□□ -2.79
VCANP13611 SNORD82-201ENST00000365530 70 ntBASIC-2.4□□□□□ -2.79
VCANP13611 5S_rRNA.15-201ENST00000611169 127 ntBASIC-2.4□□□□□ -2.79
VCANP13611 RNU6-244P-201ENST00000391028 104 ntBASIC-2.41□□□□□ -2.79
VCANP13611 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-2.41□□□□□ -2.79
VCANP13611 RPS3AP52-201ENST00000435639 297 ntBASIC-2.41□□□□□ -2.8
VCANP13611 SNORD2-201ENST00000459163 69 ntBASIC-2.41□□□□□ -2.8
VCANP13611 Y_RNA.637-201ENST00000459424 114 ntBASIC-2.41□□□□□ -2.8
VCANP13611 C1DP5-201ENST00000525775 383 ntBASIC-2.41□□□□□ -2.8
VCANP13611 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-2.41□□□□□ -2.8
VCANP13611 Y_RNA.785-201ENST00000384290 109 ntBASIC-2.41□□□□□ -2.8
VCANP13611 BNIP3P9-201ENST00000603714 553 ntBASIC-2.41□□□□□ -2.8
VCANP13611 MIR548I3-201ENST00000408378 149 ntBASIC-2.42□□□□□ -2.8
VCANP13611 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-2.42□□□□□ -2.8
VCANP13611 RNU6-1146P-201ENST00000516282 102 ntBASIC-2.42□□□□□ -2.8
VCANP13611 AL159972.1-201ENST00000625150 448 ntBASIC-2.42□□□□□ -2.8
VCANP13611 RNU6-442P-201ENST00000383968 104 ntBASIC-2.42□□□□□ -2.8
VCANP13611 VN1R88P-201ENST00000596787 292 ntBASIC-2.42□□□□□ -2.8
VCANP13611 MIR8066-201ENST00000617280 78 ntBASIC-2.42□□□□□ -2.8
VCANP13611 HIGD1AP15-201ENST00000416198 280 ntBASIC-2.43□□□□□ -2.8
VCANP13611 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-2.43□□□□□ -2.8
VCANP13611 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-2.43□□□□□ -2.8
VCANP13611 AC120024.2-201ENST00000576526 175 ntBASIC-2.43□□□□□ -2.8
VCANP13611 AC103591.3-201ENST00000608684 209 ntBASIC-2.43□□□□□ -2.8
VCANP13611 Y_RNA.381-201ENST00000365666 102 ntBASIC-2.43□□□□□ -2.8
VCANP13611 AC090960.1-201ENST00000421072 306 ntBASIC-2.43□□□□□ -2.8
VCANP13611 MIR4782-201ENST00000577987 79 ntBASIC-2.43□□□□□ -2.8
VCANP13611 AC004067.1-201ENST00000608733 700 ntBASIC-2.43□□□□□ -2.8
VCANP13611 U6.108-201ENST00000637764 58 ntBASIC-2.43□□□□□ -2.8
VCANP13611 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.43□□□□□ -2.8
VCANP13611 RNU6-1339P-201ENST00000363574 91 ntBASIC-2.43□□□□□ -2.8
VCANP13611 SNRPGP14-201ENST00000435400 219 ntBASIC-2.43□□□□□ -2.8
VCANP13611 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.43□□□□□ -2.8
VCANP13611 AL355375.2-201ENST00000574825 175 ntBASIC-2.43□□□□□ -2.8
VCANP13611 RNU6-824P-201ENST00000363724 104 ntBASIC-2.44□□□□□ -2.8
VCANP13611 MTND1P26-201ENST00000440488 538 ntBASIC-2.44□□□□□ -2.8
VCANP13611 AL353572.1-201ENST00000442490 417 ntBASIC-2.44□□□□□ -2.8
VCANP13611 AC110760.3-201ENST00000598794 467 ntBASIC-2.44□□□□□ -2.8
VCANP13611 SNORA62.4-201ENST00000365504 151 ntBASIC-2.44□□□□□ -2.8
VCANP13611 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-2.44□□□□□ -2.8
VCANP13611 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-2.44□□□□□ -2.8
VCANP13611 Y_RNA.394-201ENST00000383942 103 ntBASIC-2.44□□□□□ -2.8
VCANP13611 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-2.44□□□□□ -2.8
VCANP13611 MIR6740-201ENST00000618268 113 ntBASIC-2.44□□□□□ -2.8
VCANP13611 Y_RNA.221-201ENST00000364248 96 ntBASIC-2.45□□□□□ -2.8
VCANP13611 RNU4-50P-201ENST00000364361 141 ntBASIC-2.45□□□□□ -2.8
VCANP13611 Y_RNA.380-201ENST00000365663 111 ntBASIC-2.45□□□□□ -2.8
VCANP13611 RNU6-125P-201ENST00000384505 107 ntBASIC-2.45□□□□□ -2.8
VCANP13611 RNU6-58P-201ENST00000517143 103 ntBASIC-2.45□□□□□ -2.8
VCANP13611 RNU6-924P-201ENST00000362926 108 ntBASIC-2.45□□□□□ -2.8
VCANP13611 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.45□□□□□ -2.8
VCANP13611 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-2.45□□□□□ -2.8
VCANP13611 RPL23AP30-201ENST00000432419 501 ntBASIC-2.45□□□□□ -2.8
VCANP13611 Y_RNA.697-201ENST00000516776 113 ntBASIC-2.45□□□□□ -2.8
VCANP13611 RNU6-856P-201ENST00000516959 98 ntBASIC-2.45□□□□□ -2.8
VCANP13611 AC069113.1-201ENST00000517763 267 ntBASIC-2.45□□□□□ -2.8
VCANP13611 AL137161.1-201ENST00000532231 390 ntBASIC-2.45□□□□□ -2.8
VCANP13611 AL731768.1-201ENST00000603124 139 ntBASIC-2.45□□□□□ -2.8
VCANP13611 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.46□□□□□ -2.8
VCANP13611 RNU4-20P-201ENST00000365601 151 ntBASIC-2.46□□□□□ -2.8
VCANP13611 uc_338.4-201ENST00000616635 176 ntBASIC-2.46□□□□□ -2.8
VCANP13611 ZNF736P8Y-201ENST00000451913 669 ntBASIC-2.46□□□□□ -2.8
VCANP13611 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-2.46□□□□□ -2.8
VCANP13611 DPPA3P3-201ENST00000603842 430 ntBASIC-2.46□□□□□ -2.8
VCANP13611 RNU6-417P-201ENST00000384712 107 ntBASIC-2.47□□□□□ -2.8
VCANP13611 SNORA75.4-201ENST00000391278 119 ntBASIC-2.47□□□□□ -2.8
VCANP13611 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.47□□□□□ -2.8
VCANP13611 RNU5F-4P-201ENST00000516581 114 ntBASIC-2.47□□□□□ -2.8
VCANP13611 AL451054.2-201ENST00000420896 202 ntBASIC-2.47□□□□□ -2.8
VCANP13611 RNU6-948P-201ENST00000516374 107 ntBASIC-2.47□□□□□ -2.8
VCANP13611 SNRPGP1-201ENST00000553864 222 ntBASIC-2.47□□□□□ -2.8
VCANP13611 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.47□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms