Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 RNU2-61P-201ENST00000411069 191 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 AC090844.1-201ENST00000422019 156 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 RNU7-185P-201ENST00000459215 60 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 RNU7-87P-201ENST00000459343 62 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 RNU6-848P-201ENST00000515948 107 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 RNU6-617P-201ENST00000516147 107 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 RNU6-473P-201ENST00000516164 107 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.47□□□□□ -2.48
TPM1P09493 AC010332.2-201ENST00000613083 1904 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 MIR330-201ENST00000362196 94 ntBASIC-0.48□□□□□ -2.49
TPM1P09493 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.48□□□□□ -2.49
TPM1P09493 RNU6-268P-201ENST00000364174 107 ntBASIC-0.48□□□□□ -2.49
TPM1P09493 RNU6-318P-201ENST00000384283 103 ntBASIC-0.48□□□□□ -2.49
TPM1P09493 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.48□□□□□ -2.49
TPM1P09493 MTATP6P19-201ENST00000413797 659 ntBASIC-0.48□□□□□ -2.49
TPM1P09493 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.48□□□□□ -2.49
TPM1P09493 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.48□□□□□ -2.49
TPM1P09493 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.48□□□□□ -2.49
TPM1P09493 AC004467.1-201ENST00000615678 330 ntBASIC-0.48□□□□□ -2.49
TPM1P09493 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.49□□□□□ -2.49
TPM1P09493 RNU6-929P-201ENST00000384429 107 ntBASIC-0.49□□□□□ -2.49
TPM1P09493 MIR802-201ENST00000390235 94 ntBASIC-0.49□□□□□ -2.49
TPM1P09493 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
TPM1P09493 RNU6-855P-201ENST00000410395 104 ntBASIC-0.49□□□□□ -2.49
TPM1P09493 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.49□□□□□ -2.49
TPM1P09493 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.49□□□□□ -2.49
TPM1P09493 AC006380.1-201ENST00000603598 186 ntBASIC-0.49□□□□□ -2.49
TPM1P09493 MIR6740-201ENST00000618268 113 ntBASIC-0.49□□□□□ -2.49
TPM1P09493 AL391262.2-201ENST00000622466 494 ntBASIC-0.49□□□□□ -2.49
TPM1P09493 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 RNU6-302P-201ENST00000365249 107 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 SEPT14P3-201ENST00000439401 183 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 AL732372.2-207ENST00000445840 183 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 SEPT14P2-201ENST00000453405 183 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 snoU13.16-201ENST00000459350 104 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 SEPT14P4-201ENST00000513445 186 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 RNU7-129P-201ENST00000516128 62 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 RNU6-469P-201ENST00000516253 101 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 FO082796.1-201ENST00000523795 183 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.5□□□□□ -2.49
TPM1P09493 MIR7107-201ENST00000611489 80 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 SNORD38B-202ENST00000625943 69 ntBASIC-0.5□□□□□ -2.49
TPM1P09493 U8.7-201ENST00000364940 136 ntBASIC-0.51□□□□□ -2.49
TPM1P09493 MIR193B-201ENST00000384907 83 ntBASIC-0.51□□□□□ -2.49
TPM1P09493 MIR892B-201ENST00000401279 77 ntBASIC-0.51□□□□□ -2.49
TPM1P09493 AC073114.1-201ENST00000612027 490 ntBASIC-0.51□□□□□ -2.49
TPM1P09493 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.51□□□□□ -2.49
TPM1P09493 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 RNU6-756P-201ENST00000383997 107 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 RNY1P4-201ENST00000384595 115 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 SNORA26.5-201ENST00000391215 123 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 MIR548H2-201ENST00000408874 88 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.52□□□□□ -2.49
TPM1P09493 AL512326.2-201ENST00000426359 151 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 CHEK2P4-201ENST00000450340 246 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 RNU6-956P-201ENST00000458868 103 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 AC104692.1-201ENST00000472406 90 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.52□□□□□ -2.49
TPM1P09493 AL355297.3-201ENST00000604082 446 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.52□□□□□ -2.49
TPM1P09493 RNY1-201ENST00000364228 113 ntBASIC-0.53□□□□□ -2.49
TPM1P09493 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.53□□□□□ -2.49
TPM1P09493 RNU6V-201ENST00000384105 107 ntBASIC-0.53□□□□□ -2.49
TPM1P09493 RNU6-514P-201ENST00000384208 107 ntBASIC-0.53□□□□□ -2.49
TPM1P09493 RNU6-842P-201ENST00000384269 107 ntBASIC-0.53□□□□□ -2.49
TPM1P09493 MIR760-201ENST00000390220 80 ntBASIC-0.53□□□□□ -2.49
TPM1P09493 RNU6-192P-201ENST00000391253 100 ntBASIC-0.53□□□□□ -2.49
TPM1P09493 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.53□□□□□ -2.49
TPM1P09493 AC105029.1-201ENST00000520250 669 ntBASIC-0.53□□□□□ -2.49
TPM1P09493 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.53□□□□□ -2.49
TPM1P09493 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.53□□□□□ -2.49
TPM1P09493 DISC2.1-201ENST00000612827 205 ntBASIC-0.53□□□□□ -2.49
TPM1P09493 RNU6-874P-201ENST00000362390 105 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 MIR518F-201ENST00000384973 87 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 SNORD12B-201ENST00000410433 91 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 USP9YP30-201ENST00000430729 455 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 RNU6-408P-201ENST00000515910 100 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 RNU4-49P-201ENST00000516080 140 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.54□□□□□ -2.5
TPM1P09493 JPX_2.1-201ENST00000614161 69 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 AC022306.2-201ENST00000617563 647 ntBASIC-0.54□□□□□ -2.5
TPM1P09493 RNA5SP128-201ENST00000365305 116 ntBASIC-0.55□□□□□ -2.5
TPM1P09493 RNU6-767P-201ENST00000384132 107 ntBASIC-0.55□□□□□ -2.5
TPM1P09493 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.55□□□□□ -2.5
TPM1P09493 MTND3P21-201ENST00000433774 331 ntBASIC-0.55□□□□□ -2.5
TPM1P09493 MTND1P24-201ENST00000552175 861 ntBASIC-0.55□□□□□ -2.5
TPM1P09493 AC018638.8-201ENST00000588755 281 ntBASIC-0.55□□□□□ -2.5
TPM1P09493 MIR6863-201ENST00000636112 90 ntBASIC-0.55□□□□□ -2.5
TPM1P09493 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.56□□□□□ -2.5
TPM1P09493 SNORA24-201ENST00000384096 131 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms