Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC005042.3-201ENST00000453230 174 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 Y_RNA.639-201ENST00000458981 102 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 RPL39P38-201ENST00000467018 153 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 RPS23P4-201ENST00000487908 423 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 RNU7-12P-201ENST00000516030 62 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 AC104695.3-201ENST00000604052 296 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 AC005828.6-201ENST00000606610 232 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 MIR1302-2-201ENST00000607096 138 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.23□□□□□ -2.21
PDGFBP01127 AC073349.3-201ENST00000617616 186 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.23□□□□□ -2.21
PDGFBP01127 AC068647.2-201ENST00000637380 353 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
PDGFBP01127 Y_RNA.230-201ENST00000364348 109 ntBASIC1.22□□□□□ -2.21
PDGFBP01127 PIGPP3-201ENST00000425307 415 ntBASIC1.22□□□□□ -2.21
PDGFBP01127 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.22□□□□□ -2.21
PDGFBP01127 RNU6-947P-201ENST00000516264 106 ntBASIC1.22□□□□□ -2.21
PDGFBP01127 RNU6-341P-201ENST00000516973 96 ntBASIC1.22□□□□□ -2.21
PDGFBP01127 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
PDGFBP01127 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.22□□□□□ -2.21
PDGFBP01127 MIR3664-201ENST00000579074 99 ntBASIC1.22□□□□□ -2.21
PDGFBP01127 AC091178.2-201ENST00000584401 117 ntBASIC1.22□□□□□ -2.21
PDGFBP01127 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
PDGFBP01127 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
PDGFBP01127 MIR373-201ENST00000362273 69 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 SNORD81.1-201ENST00000363064 77 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 SNORA70.7-201ENST00000384159 133 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 Y_RNA.526-201ENST00000384572 110 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 DYNLT3P2-201ENST00000442517 295 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 RNU6-922P-201ENST00000516753 99 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 AP002004.2-201ENST00000531656 154 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 MIR3171-201ENST00000584270 74 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 SNORA28-201ENST00000606769 126 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 AC010205.1-201ENST00000616668 449 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 AL513423.1-201ENST00000621695 132 ntBASIC1.21□□□□□ -2.22
PDGFBP01127 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PDGFBP01127 Y_RNA.128-201ENST00000363391 112 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 Y_RNA.341-201ENST00000365341 102 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 Y_RNA.551-201ENST00000384661 102 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 MIR520G-201ENST00000385064 90 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 RNU6-823P-201ENST00000391042 103 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 MIR548P-201ENST00000408336 84 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 AL162725.1-201ENST00000435405 301 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 AC104332.1-201ENST00000440471 797 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 SUMO1P2-201ENST00000452524 304 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.2□□□□□ -2.22
PDGFBP01127 RNY3P15-201ENST00000516297 97 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 RNU6-897P-201ENST00000517135 105 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 AC136932.1-201ENST00000574771 208 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 RAC1P9-201ENST00000604990 392 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 AC004832.4-201ENST00000608952 331 ntBASIC1.2□□□□□ -2.22
PDGFBP01127 RNA5SP327-201ENST00000362494 101 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 SNORD113-8-201ENST00000363497 74 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 RNU6-1048P-201ENST00000364054 107 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 RNU4-76P-201ENST00000364509 141 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 Y_RNA.383-201ENST00000383855 97 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 RNU6-163P-201ENST00000384396 106 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
PDGFBP01127 RNU2-61P-201ENST00000411069 191 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 Z98949.2-201ENST00000440996 144 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 HSPE1P13-201ENST00000451143 297 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 RPS20P10-201ENST00000451209 253 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 AC117454.1-201ENST00000491120 168 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 OR9P1P-201ENST00000496431 281 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 Y_RNA.715-201ENST00000517082 110 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.19□□□□□ -2.22
PDGFBP01127 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.19□□□□□ -2.22
PDGFBP01127 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.19□□□□□ -2.22
PDGFBP01127 MIR376A1-201ENST00000616574 68 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 AC134503.1-201ENST00000633048 54 ntBASIC1.19□□□□□ -2.22
PDGFBP01127 RNU4-80P-201ENST00000363200 141 ntBASIC1.18□□□□□ -2.22
PDGFBP01127 RNU1-133P-201ENST00000364867 167 ntBASIC1.18□□□□□ -2.22
PDGFBP01127 MIR660-201ENST00000385235 97 ntBASIC1.18□□□□□ -2.22
PDGFBP01127 POLR2KP2-201ENST00000438155 177 ntBASIC1.18□□□□□ -2.22
PDGFBP01127 AC098869.1-201ENST00000481627 292 ntBASIC1.18□□□□□ -2.22
PDGFBP01127 Y_RNA.701-201ENST00000516812 110 ntBASIC1.18□□□□□ -2.22
PDGFBP01127 AL356055.1-201ENST00000602528 446 ntBASIC1.18□□□□□ -2.22
PDGFBP01127 AL591926.4-201ENST00000616895 298 ntBASIC1.18□□□□□ -2.22
PDGFBP01127 AC134026.1-201ENST00000623249 2239 ntBASIC1.17□□□□□ -2.22
PDGFBP01127 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PDGFBP01127 RNU6-424P-201ENST00000384367 105 ntBASIC1.17□□□□□ -2.22
PDGFBP01127 RNU6-102P-201ENST00000384485 104 ntBASIC1.17□□□□□ -2.22
PDGFBP01127 MIR562-201ENST00000384894 95 ntBASIC1.17□□□□□ -2.22
PDGFBP01127 AL390729.2-201ENST00000416137 156 ntBASIC1.17□□□□□ -2.22
PDGFBP01127 SNORA40.15-201ENST00000516884 107 ntBASIC1.17□□□□□ -2.22
PDGFBP01127 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
PDGFBP01127 MIR4423-201ENST00000580922 80 ntBASIC1.17□□□□□ -2.22
PDGFBP01127 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.17□□□□□ -2.22
PDGFBP01127 AC005972.2-201ENST00000604690 348 ntBASIC1.17□□□□□ -2.22
PDGFBP01127 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
PDGFBP01127 RNU6-1084P-201ENST00000362498 107 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 Y_RNA.105-201ENST00000363182 111 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 Y_RNA.210-201ENST00000364161 110 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 RNU6-806P-201ENST00000365147 105 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 Y_RNA.462-201ENST00000384268 102 ntBASIC1.16□□□□□ -2.22
PDGFBP01127 RNA5SP482-201ENST00000391269 118 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms