Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 Y_RNA.322-201ENST00000365151 102 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 RNU6-376P-201ENST00000384731 106 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 MIR562-201ENST00000384894 95 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 MT-TG-201ENST00000387429 68 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 SNORA26.5-201ENST00000391215 123 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 RPS4XP11-201ENST00000446897 772 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 Y_RNA.650-201ENST00000459002 102 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 RPL39P38-201ENST00000467018 153 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 AC091021.1-201ENST00000468051 388 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN1O95832 SCARNA24.2-201ENST00000516968 130 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 Y_RNA.777-201ENST00000516982 102 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CLDN1O95832 AL358944.1-201ENST00000528537 144 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 MIR4419B-201ENST00000577260 68 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 MIR4282-201ENST00000583613 67 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN1O95832 Y_RNA.771-201ENST00000598668 102 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 AP003357.1-201ENST00000604497 148 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 AC005972.2-201ENST00000604690 348 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 Y_RNA.789-201ENST00000622480 102 ntBASIC1.5□□□□□ -2.17
CLDN1O95832 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.5□□□□□ -2.17
CLDN1O95832 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CLDN1O95832 SNORA7.1-201ENST00000363750 139 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 RNU6-763P-201ENST00000390865 106 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 RNA5SP212-201ENST00000391223 107 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 RNU2-14P-201ENST00000411053 191 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 Y_RNA.637-201ENST00000459424 114 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 RNU7-115P-201ENST00000516433 55 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 SNORA31.17-201ENST00000516953 127 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 AC127455.1-201ENST00000565496 145 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 MIR3618-201ENST00000580330 88 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 AL512605.2-201ENST00000592972 256 ntBASIC1.49□□□□□ -2.17
CLDN1O95832 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.49□□□□□ -2.17
CLDN1O95832 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLDN1O95832 Y_RNA.20-201ENST00000362479 113 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 Y_RNA.307-201ENST00000365022 117 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 Y_RNA.416-201ENST00000384014 113 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 SNORA72-201ENST00000384339 132 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 Y_RNA.478-201ENST00000384358 107 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 SNORA12.1-201ENST00000390873 148 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 RNA5SP109-201ENST00000391010 116 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 AL603910.2-201ENST00000407268 136 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 RNU7-141P-201ENST00000459304 62 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 RNU6-1023P-201ENST00000516137 106 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 Y_RNA.680-201ENST00000516441 93 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 RNA5SP481-201ENST00000516814 122 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 RNU7-116P-201ENST00000516940 62 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 RNU6-1096P-201ENST00000517089 102 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.48□□□□□ -2.17
CLDN1O95832 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 AL008718.3-201ENST00000610217 321 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 MIR548AY-201ENST00000617669 107 ntBASIC1.48□□□□□ -2.17
CLDN1O95832 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLDN1O95832 RNU6-740P-201ENST00000364734 105 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 RNU6-60P-201ENST00000364792 103 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 Y_RNA.401-201ENST00000383965 117 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 Y_RNA.447-201ENST00000384184 113 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 RNU6-662P-201ENST00000384253 104 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 Y_RNA.618-201ENST00000410949 107 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 AC245047.3-201ENST00000429428 127 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.47□□□□□ -2.17
CLDN1O95832 SNORA31.10-201ENST00000516482 106 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 AC024405.2-202ENST00000532731 184 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 AL162424.1-201ENST00000602325 221 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 AC022709.1-201ENST00000615967 87 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 AC068700.1-201ENST00000565862 3754 ntBASIC1.47□□□□□ -2.17
CLDN1O95832 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CLDN1O95832 RNU6-1289P-201ENST00000384431 106 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 Y_RNA.539-201ENST00000384635 107 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 AP002004.2-201ENST00000531656 154 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 CBX3P4-201ENST00000538909 354 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 MIR4643-201ENST00000577473 78 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.46□□□□□ -2.18
CLDN1O95832 MIR4713-201ENST00000582691 75 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 AC005357.1-201ENST00000588399 301 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 AP000942.4-201ENST00000604811 241 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 AC011921.3-201ENST00000605540 361 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.46□□□□□ -2.18
CLDN1O95832 AC013791.1-201ENST00000616619 62 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 MIR8054-201ENST00000620877 86 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 AC068647.2-201ENST00000637380 353 ntBASIC1.46□□□□□ -2.18
CLDN1O95832 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CLDN1O95832 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CLDN1O95832 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CLDN1O95832 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CLDN1O95832 SNORA1B-201ENST00000362535 133 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 Y_RNA.117-201ENST00000363294 101 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 RNU6-674P-201ENST00000363831 107 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 RNU6-899P-201ENST00000363947 107 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 RNU4-13P-201ENST00000364019 141 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 RNU6-1048P-201ENST00000364054 107 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 U8.7-201ENST00000364940 136 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 SNORA4.2-201ENST00000365313 147 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 RNU6-950P-201ENST00000384651 107 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 HSPE1P9-201ENST00000440046 311 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 RNA5SP57-201ENST00000459463 123 ntBASIC1.45□□□□□ -2.18
CLDN1O95832 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.45□□□□□ -2.18
CLDN1O95832 RNU6-1291P-201ENST00000516591 104 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms