Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SCARNA17-201ENST00000516183 144 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 AC022616.4-201ENST00000522985 181 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.17□□□□□ -2.6
SIX6O95475 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 AC005828.6-201ENST00000606610 232 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 AP001330.5-201ENST00000607176 411 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 AP002371.2-201ENST00000624450 503 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 MIR1-2-201ENST00000384961 85 ntBASIC-1.18□□□□□ -2.6
SIX6O95475 SNORD83B-201ENST00000386745 93 ntBASIC-1.18□□□□□ -2.6
SIX6O95475 RNU6-325P-201ENST00000411132 105 ntBASIC-1.18□□□□□ -2.6
SIX6O95475 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.18□□□□□ -2.6
SIX6O95475 SCARNA1-201ENST00000517138 166 ntBASIC-1.18□□□□□ -2.6
SIX6O95475 MIR548AX-201ENST00000580117 73 ntBASIC-1.18□□□□□ -2.6
SIX6O95475 MIR6082-201ENST00000613604 109 ntBASIC-1.18□□□□□ -2.6
SIX6O95475 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.19□□□□□ -2.6
SIX6O95475 RNU6-726P-201ENST00000364680 107 ntBASIC-1.19□□□□□ -2.6
SIX6O95475 RNU6-47P-201ENST00000383866 107 ntBASIC-1.19□□□□□ -2.6
SIX6O95475 RNU6-442P-201ENST00000383968 104 ntBASIC-1.19□□□□□ -2.6
SIX6O95475 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.19□□□□□ -2.6
SIX6O95475 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.19□□□□□ -2.6
SIX6O95475 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.19□□□□□ -2.6
SIX6O95475 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.19□□□□□ -2.6
SIX6O95475 AL607023.1-201ENST00000620045 248 ntBASIC-1.19□□□□□ -2.6
SIX6O95475 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.19□□□□□ -2.6
SIX6O95475 SNORD114-7-201ENST00000362520 77 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 RNU6-403P-201ENST00000363163 104 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 RNU6-535P-201ENST00000384722 107 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
SIX6O95475 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 SNRPGP14-201ENST00000435400 219 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 UQCRBP2-201ENST00000447827 297 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 SPINT5P-201ENST00000448174 155 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.2□□□□□ -2.6
SIX6O95475 U8.19-201ENST00000459095 133 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 U8.22-201ENST00000459141 133 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 RPL7P42-201ENST00000481005 679 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 RPL30P10-201ENST00000488148 337 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 RNU6-765P-201ENST00000516916 99 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 AL137161.1-201ENST00000532231 390 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.2□□□□□ -2.6
SIX6O95475 POLR3GP1-201ENST00000594073 261 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 AC005609.4-201ENST00000625071 447 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 AC093726.3-201ENST00000637588 150 ntBASIC-1.2□□□□□ -2.6
SIX6O95475 MTCO2P21-201ENST00000419780 677 ntBASIC-1.21□□□□□ -2.6
SIX6O95475 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.21□□□□□ -2.6
SIX6O95475 RNU6-881P-201ENST00000516813 102 ntBASIC-1.21□□□□□ -2.6
SIX6O95475 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.21□□□□□ -2.6
SIX6O95475 CPDP1-201ENST00000579660 283 ntBASIC-1.21□□□□□ -2.6
SIX6O95475 AC073869.9-201ENST00000641610 120 ntBASIC-1.21□□□□□ -2.6
SIX6O95475 SNORD50.1-201ENST00000362987 71 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 RNU6-501P-201ENST00000364072 100 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 RNU6-108P-201ENST00000365558 107 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 SNORA24-201ENST00000384096 131 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 RNU6-708P-201ENST00000384217 107 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 RNU6-933P-201ENST00000384424 107 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.22□□□□□ -2.6
SIX6O95475 RPL39P25-201ENST00000449384 154 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 RNU2-11P-201ENST00000459191 187 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 AC021146.6-201ENST00000514659 117 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 MIR5583-1-201ENST00000580941 59 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 AL133255.1-201ENST00000606374 441 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 AC087588.2-201ENST00000617667 426 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.22□□□□□ -2.6
SIX6O95475 Z97988.1-201ENST00000637697 135 ntBASIC-1.22□□□□□ -2.6
SIX6O95475 RNU6-268P-201ENST00000364174 107 ntBASIC-1.23□□□□□ -2.61
SIX6O95475 RNU4-36P-201ENST00000364294 144 ntBASIC-1.23□□□□□ -2.61
SIX6O95475 RNA5SP118-201ENST00000410385 109 ntBASIC-1.23□□□□□ -2.61
SIX6O95475 RNU2-29P-201ENST00000410423 189 ntBASIC-1.23□□□□□ -2.61
SIX6O95475 MTATP6P18-201ENST00000417994 673 ntBASIC-1.23□□□□□ -2.61
SIX6O95475 USP9YP12-201ENST00000450481 570 ntBASIC-1.23□□□□□ -2.61
SIX6O95475 AC022878.1-201ENST00000530684 149 ntBASIC-1.23□□□□□ -2.61
SIX6O95475 MTND1P24-201ENST00000552175 861 ntBASIC-1.23□□□□□ -2.61
SIX6O95475 AC005972.2-201ENST00000604690 348 ntBASIC-1.23□□□□□ -2.61
SIX6O95475 RNU6-490P-201ENST00000362985 107 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 MIR516B1-201ENST00000385211 90 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
SIX6O95475 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.24□□□□□ -2.61
SIX6O95475 RNU7-67P-201ENST00000459003 62 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 MTCO3P38-201ENST00000468910 766 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.24□□□□□ -2.61
SIX6O95475 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 AP003072.1-201ENST00000531740 145 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 MTND5P34-201ENST00000568888 325 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 Z84480.1-201ENST00000605131 311 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 AC006566.1-201ENST00000608943 513 ntBASIC-1.24□□□□□ -2.61
SIX6O95475 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.25□□□□□ -2.61
SIX6O95475 RNY3P5-201ENST00000384127 102 ntBASIC-1.25□□□□□ -2.61
SIX6O95475 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.25□□□□□ -2.61
SIX6O95475 MTND1P14-201ENST00000427400 950 ntBASIC-1.25□□□□□ -2.61
SIX6O95475 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.25□□□□□ -2.61
SIX6O95475 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.25□□□□□ -2.61
SIX6O95475 MTCO1P29-201ENST00000496868 288 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms