Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AC093534.1-201ENST00000504977 132 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 AC105313.1-201ENST00000509121 353 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 AC104695.3-201ENST00000604052 296 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.38□□□□□ -2.35
CLDN11O75508 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.38□□□□□ -2.35
CLDN11O75508 Y_RNA.3-201ENST00000362331 103 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 SNORD18A-201ENST00000363753 72 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 RNU6-654P-201ENST00000364373 107 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 SNORA36.2-201ENST00000384004 127 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 MIR216A-201ENST00000385063 110 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 SNORA75.4-201ENST00000391278 119 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 AC011352.1-201ENST00000512300 793 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.37□□□□□ -2.35
CLDN11O75508 AC005176.2-201ENST00000596933 147 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 MIR7111-201ENST00000619751 72 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 AC091925.1-201ENST00000623204 462 ntBASIC0.37□□□□□ -2.35
CLDN11O75508 Y_RNA.88-201ENST00000363029 99 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 Y_RNA.112-201ENST00000363250 102 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 Y_RNA.148-201ENST00000363557 117 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 Y_RNA.370-201ENST00000365589 108 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 MIR625-201ENST00000385047 85 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 RNU6-613P-201ENST00000410412 108 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.36□□□□□ -2.35
CLDN11O75508 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 RNU6-1012P-201ENST00000516606 109 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 MIR2115-201ENST00000516657 100 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 MIR548AR-201ENST00000582191 57 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 AL355073.2-201ENST00000612106 557 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 AC090517.2-201ENST00000614966 680 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 AC007742.2-201ENST00000618226 398 ntBASIC0.36□□□□□ -2.35
CLDN11O75508 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 SNORD14E-201ENST00000364009 85 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 Y_RNA.446-201ENST00000384178 104 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 SNORD38C-201ENST00000384381 69 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 Y_RNA.577-201ENST00000384794 101 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 RNU6-192P-201ENST00000391253 100 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 Y_RNA.592-201ENST00000410274 109 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 AC016907.1-201ENST00000419483 435 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 RNU6-436P-201ENST00000516171 114 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 RNU6-155P-201ENST00000516347 100 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 AC080013.6-201ENST00000606185 215 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 AC087588.2-201ENST00000617667 426 ntBASIC0.35□□□□□ -2.35
CLDN11O75508 RNU6-626P-201ENST00000363354 107 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 Y_RNA.393-201ENST00000383936 102 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 RNU6-20P-201ENST00000384106 107 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 Y_RNA.516-201ENST00000384541 124 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 MIR613-201ENST00000385248 95 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 RNU6-1199P-201ENST00000411249 104 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 AC244023.1-201ENST00000426884 112 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 PRDX4P1-201ENST00000507189 574 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.34□□□□□ -2.36
CLDN11O75508 RNU6-264P-201ENST00000517134 104 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 AL355375.2-201ENST00000574825 175 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 AC242498.1-201ENST00000604134 111 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 AC002553.4-201ENST00000616896 331 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 AC243994.1-201ENST00000618627 109 ntBASIC0.34□□□□□ -2.36
CLDN11O75508 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CLDN11O75508 Y_RNA.168-201ENST00000363740 102 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 RNU6-396P-201ENST00000365369 105 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 SNORD28B-201ENST00000390993 75 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 MIR1277-201ENST00000408536 78 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 RNA5SP95-201ENST00000410319 137 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 RNU6-1156P-201ENST00000410365 100 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 AC144568.1-201ENST00000520139 137 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 RN7SL793P-201ENST00000583259 296 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 AC012433.1-201ENST00000588916 398 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 AC060780.3-201ENST00000589464 80 ntBASIC0.33□□□□□ -2.36
CLDN11O75508 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CLDN11O75508 RNU6-1323P-201ENST00000384025 107 ntBASIC0.32□□□□□ -2.36
CLDN11O75508 RNY3P4-201ENST00000384428 101 ntBASIC0.32□□□□□ -2.36
CLDN11O75508 SNORD78.2-201ENST00000391076 69 ntBASIC0.32□□□□□ -2.36
CLDN11O75508 RNU6-710P-201ENST00000410424 105 ntBASIC0.32□□□□□ -2.36
CLDN11O75508 RNU6-177P-201ENST00000411257 104 ntBASIC0.32□□□□□ -2.36
CLDN11O75508 RNU7-116P-201ENST00000516940 62 ntBASIC0.32□□□□□ -2.36
CLDN11O75508 AC011712.1-201ENST00000588959 234 ntBASIC0.32□□□□□ -2.36
CLDN11O75508 RBM11P1-201ENST00000604951 799 ntBASIC0.32□□□□□ -2.36
CLDN11O75508 AL669831.3-213ENST00000636676 183 ntBASIC0.32□□□□□ -2.36
CLDN11O75508 Y_RNA.230-201ENST00000364348 109 ntBASIC0.31□□□□□ -2.36
CLDN11O75508 MIR140-201ENST00000385282 100 ntBASIC0.31□□□□□ -2.36
CLDN11O75508 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
CLDN11O75508 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN11O75508 RNU6-830P-201ENST00000516353 107 ntBASIC0.31□□□□□ -2.36
CLDN11O75508 RNU7-4P-201ENST00000516961 62 ntBASIC0.31□□□□□ -2.36
CLDN11O75508 AC087685.1-201ENST00000587507 141 ntBASIC0.31□□□□□ -2.36
CLDN11O75508 Pinc.1-201ENST00000616452 154 ntBASIC0.31□□□□□ -2.36
CLDN11O75508 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CLDN11O75508 Y_RNA.72-201ENST00000362894 103 ntBASIC0.3□□□□□ -2.36
CLDN11O75508 Y_RNA.146-201ENST00000363549 102 ntBASIC0.3□□□□□ -2.36
CLDN11O75508 Y_RNA.376-201ENST00000365638 108 ntBASIC0.3□□□□□ -2.36
CLDN11O75508 RNU6-442P-201ENST00000383968 104 ntBASIC0.3□□□□□ -2.36
CLDN11O75508 MIR802-201ENST00000390235 94 ntBASIC0.3□□□□□ -2.36
CLDN11O75508 MIR548F1-201ENST00000408667 84 ntBASIC0.3□□□□□ -2.36
CLDN11O75508 MCFD2P1-201ENST00000417812 300 ntBASIC0.3□□□□□ -2.36
CLDN11O75508 MTCO2P27-201ENST00000420740 428 ntBASIC0.3□□□□□ -2.36
CLDN11O75508 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.3□□□□□ -2.36
CLDN11O75508 RNU6-718P-201ENST00000516166 105 ntBASIC0.3□□□□□ -2.36
CLDN11O75508 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.3□□□□□ -2.36
CLDN11O75508 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms